Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Homo sapiens vastus lateralis (VL) and tibialis anterior (TA) RNA sequencing

PROVIDER: PRJNA976807 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24750900_1.fastq.gz	Fastqsanger.gz
	SRR24750900_2.fastq.gz	Fastqsanger.gz
	SRR24750901_1.fastq.gz	Fastqsanger.gz
	SRR24750901_2.fastq.gz	Fastqsanger.gz
	SRR24750902_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 76

Similar Datasets

1beb7e6d-a63e-4d70-a216-c4aa9477f6c1 - samples

Project description:This project includes RNA-sequencing data from human FSHD and control skeletal muscle biopsies. This project includes data from 28 FSHD patients (total 37 samples, including vastus lateralis and tibialis anterior muscles) and 12 control individuals (total 24 samples, including vastus lateralis and tibialis anterior muscles).

| EGAD00001008337 | EGA

Facioscapulohumeral dystrophy transcriptome signatures correlate with different stages of disease and are marked by different MRI biomarkers

| EGAS00001005782 | EGA

Skeletal muscle allotypes

Project description:Expression profiling of 8 skeletal muscles from adult C57BL mice. Extraocular, temporalis, anterior digastric, sternocleidomastoid, triceps, diaphragm, quadraceps femoris (vastus lateralis), and tibialis anterior were evaluated using Affymetrix 430 v.2 arrays. Keywords: parallel sample

2005-09-27 | GSE1806 | GEO

Transcription profiling of mouse adult C57BL Skeletal muscle allotypes

2008-06-11 | E-GEOD-1806 | biostudies-arrayexpress

Spatial multi-omics in skeletal muscle unravel complex myofiber architecture

Project description:Spatial distribution of metabolites and phospholipids in murine tibialis anterior (TA) muscles.

2024-09-27 | PXD048809 | Pride

Exercise training attenuated the muscle mitochondria genomic response to 70 day bedrest (RNA-Seq)

Project description:The purpose of this study was to characterize the vastus lateralis (VL) gene and microRNA responses to 70 day bed rest with and without exercise countermeasures to mitigate the negative consequences of weightlessness.

2024-06-27 | GSE226973 | GEO

Exercise training attenuated the muscle mitochondria genomic response to 70 day bedrest (miRNA-Seq)

2024-06-27 | GSE226504 | GEO

Gene expression profile in mouse skeletal muscle after Mettl21e deletion

Project description:Analysis of tibialis anterior (TA) muscle isolated from wildtype (WT) and Mettl21e deletion mice (KO). Results provide unbiased gene expression profile of TA muscle after Mettl21e deletion.

2019-10-22 | GSE122024 | GEO

Deletion of miR-1/206/133 in adult muscle

Project description:Transcriptome of adult miR-1/206/133 deficient tibialis anterior (TA) muscle was compared to control TA muscle.

2022-03-22 | E-MTAB-10227 | biostudies-arrayexpress

Differential isoform expression and selective muscle involvement in muscular dystrophies

Project description:To test the hypothesis that different muscles may express variable amounts of different isoforms of muscle genes, we applied a custom-designed exon microarray containing probes for 57 muscle-specific genes to assay the transcriptional profiles in sets of human adult, lower limb skeletal muscles. Muscle biopsies from 15 individuals were selected for analysis dissected from 21 anatomically different muscles collected from eight men and seven women, ranging from 61 to 91 years The muscle tissue samples collected included samples from 11 different thigh muscles––vastus medialis, vastus lateralis, vastus intermedialis, sartorius, gracilis, semimembranosus, semitendinosus, biceps femoris, adductor magnus, adductor longus, and rectus femoris––and 10 lower leg muscles––flexor digitorum longus, extensor digitorum longus, tibialis posterior, tibialis anterior, peroneus longus/brevis, extensor hallucis longus, gastrocnemius lateralis, gastrocnemius medialis, flexor hallucis longus, and soleus. Approximately five to seven muscle pieces were collected from each individual muscle sampled. The muscle sample pieces obtained for histological analysis measured roughly 10 mm x 5 mm, and the pieces for RNA isolation 5 mm x 5 mm. The samples were obtained directly from the proximal vital parts of the amputated limbs and processed immediately following their removal to avoid tissue degradation.To test the hypothesis that different muscles may express variable amounts of different isoforms of muscle genes, we applied a custom-designed Agilent exon microarray containing probes for 57 muscle-specific genes to assay the transcriptional profiles in sets of human adult, lower limb skeletal muscles

2015-06-17 | E-GEOD-69938 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data