Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E-MTAB-8802

ABSTRACT: RNA sequencing of human iPSC-derived brain microvascular endothelial cells.

PROVIDER: E-MTAB-8802 | ExpressionAtlas | 2025-01-16

REPOSITORIES: ExpressionAtlas

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	E-MTAB-8802-analysis-methods.tsv	Tabular
	E-MTAB-8802-analytics.tsv	Tabular
	E-MTAB-8802-atlasExperimentSummary.Rdata	Rdata
	E-MTAB-8802-configuration.xml	Xml
	E-MTAB-8802-g1_g2-mvaPlot.png	Other

Items per page:

1 - 5 of 21

Similar Datasets

E-MTAB-8008

Project description:Transcriptome analysis of human brain microvascular endothelial cells response to Neisseria meningitidis and its antigen MafA using RNA-seq

2025-01-23 | E-MTAB-8008 | ExpressionAtlas

E-MTAB-8054

Project description:Transcriptome analysis of human brain microvascular endothelial cells response to Streptococcus pneumoniae and its antigen Adhesion lipoprotein using RNA-seq

2025-01-16 | E-MTAB-8054 | ExpressionAtlas

RNA sequencing of human iPSC-derived brain microvascular endothelial cells.

Project description:RNA sequencing of human iPSC-derived brain microvascular endothelial cells.

| PRJEB36836 | ENA

E-GEOD-97324

Project description:RNA-seq analysis of MCT8-deficient and healthy control brain microvascular endothelial cells (BMECs) and neural cells

2024-04-19 | E-GEOD-97324 | ExpressionAtlas

E-MTAB-9372

Project description:Bulk RNA-sequencing of FACS isolated human fetal lung, intestine, and kidney endothelial cells

2025-01-23 | E-MTAB-9372 | ExpressionAtlas

Induced pluripotent stem cell-derived cells model brain microvascular endothelial cell glucose metabolism

Project description:To investigate the validity of using iPSC-derived brain microvascular endothelial-like cells (BMEC) as a model of human BMEC metabolism, we ran RNA-sequencing on iPSC-derived BMEC and compared gene expression of glycolytic and TCA enzymes to publically avaliable primary BMEC datasets.

2022-08-22 | GSE211648 | GEO

mRNAseq of Huntington's disease and control patient iPSC-derived brain microvascular endothelial cells

Project description:Purpose: The goals of this study are to compare the transcriptomic profile (mRNA-seq) of HD and control patient iPSC-derived brain microvascular endotheial cells to identify alterations in gene expression. Methods: RNA were isolated from HD and control iPSC-derived brain microvascular endothelial cells. mRNAseq using Illumina TruSeq mRNA PolyA+ v2 lib prep and HiSeq 2500. Statistical difference in mRNA levels were calculated with subsequent GO and pathway analysis. Results: mRNAseq and statistical analysis revealed differentially expressed genes between HD and control iPSC-derived brain microvascular endothelial cells. Conclusions: Our study shows differentially expressed genes between HD and control iPSC-derived brain microvascular endothelial cells, and reveals gene networks that are relevant to the mechanism of HD pathogenesis.

2017-05-16 | GSE97100 | GEO

E-MTAB-8052

Project description:Transcriptome analysis of human brain microvascular endothelial cells response to interactive DIII domain of protein E of WNV and interactive DIII domain of protein E of TBEV using RNA-seq

2025-01-16 | E-MTAB-8052 | ExpressionAtlas

E-MTAB-6013

Project description:Gene expression profiling by RNA-seq of human iPSC and iPSC-derived cardiomyocytes from an Yoruban individual (NA19101)

2025-01-23 | E-MTAB-6013 | ExpressionAtlas

Effect of combinatorial transcription factor overexpression on iPSC-derived endothelial cells

Project description:We aimed to investigate how transcription factors alter brain-specific and zonation-identity of endothelial cells. We used a dox-inducible lentivirus to increase expression of specific combinations of transcription factors expressed by human brain endothelial cells in iPSC-derived endothelial cell (iEC) monolayers. Using SMART-seq we compared gene expression profiles and benchmarked gene expression to iPSC-derived brain microvascular endothelial-like cells (iBMECs).

2023-06-06 | GSE233694 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data