Seif2018 - Strain specific Salmonella Genome Scale Models (GEMs)
Ontology highlight
ABSTRACT:
SUBMITTER: 
Yara Seif
PROVIDER: MODEL1807280001 | BioModels | 2024-12-21
REPOSITORIES: BioModels
Dataset's files
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| MODEL1807280001?filename=Strain_specific_models_Salmonella.zip | Other |
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Publications
Genome-scale metabolic reconstructions of multiple Salmonella strains reveal serovar-specific metabolic traits.
Seif Yara Y Kavvas Erol E Lachance Jean-Christophe JC Yurkovich James T JT Nuccio Sean-Paul SP Fang Xin X Catoiu Edward E Raffatellu Manuela M Palsson Bernhard O BO Monk Jonathan M JM
Nature communications 20180914 1
Salmonella strains are traditionally classified into serovars based on their surface antigens. While increasing availability of whole-genome sequences has allowed for more detailed subtyping of strains, links between genotype, serovar, and host remain elusive. Here we reconstruct genome-scale metabolic models for 410 Salmonella strains spanning 64 serovars. Model-predicted growth capabilities in over 530 different environments demonstrate that: (1) the Salmonella accessory metabolic network incl ...[more]
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BioModels Database:
An enhanced, curated and annotated resource for published
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BioModels Database:
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