Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Tubulointerstitial transcriptome from ERCB subjects with chronic kidney disease and living donor biopsies.

ABSTRACT: Tubulointerstitial transcriptome from ERCB subjects with chronic kidney disease and living donor biopsies. Samples included in this analysis have been previously analyzed using older CDF definitions and are included under previous GEO submissions - GSE47184 (chronic kidney disease samples), and GSE32591 (IgA nephropathy samples). RNA from the tubulointerstitial compartment of was extracted and processed for hybridization on Affymetrix microarrays, annotated using Human Entrez Gene ID custom CDF version 19. This dataset is part of the TransQST collection.

ORGANISM(S): Homo sapiens

SUBMITTER: Sean Eddy 

PROVIDER: E-GEOD-104954 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Json Xml
altmetric image

Publications

<h4>Objectives</h4>To characterise renal tissue metabolic pathway gene expression in different forms of glomerulonephritis.<h4>Methods</h4>Patients with nephrotic syndrome (NS), antineutrophil cytoplasmic antibody-associated vasculitis (AAV), systemic lupus erythematosus (SLE) and healthy living donors (LD) were studied. Clinically indicated renal biopsies were obtained at time of diagnosis and microdissected into glomerular and tubulointerstitial compartments. Microarray-derived differential ge  ...[more]

Similar Datasets

Transcriptomics Glomerular Transcriptome from European Renal cDNA Bank subjects and living donors
2018-01-24 | E-GEOD-104948 | biostudies-arrayexpress
Transcriptomics Tubulointerstitial transcriptome from ERCB subjects with chronic kidney disease and living donor biopsies.
2018-01-24 | GSE104954 | GEO
Transcriptomics Glomerular Transcriptome from European Renal cDNA Bank subjects and living donors
2018-01-24 | GSE104948 | GEO
Transcriptomics Shared molecular targets in the glomerular transcriptome from patients with nephrotic syndrome and ANCA-associated vasculitis
2018-05-17 | E-GEOD-108109 | biostudies-arrayexpress
Transcriptomics Transcription profiling of liver, skeletal muscle and white adipose tissue from ApoE3L mice
2010-07-28 | E-TABM-1039 | biostudies-arrayexpress
Genomics,Multiomics Tubulointerstitial transcriptome from ERCB subjects with chronic kidney disease and living donor biopsies.
| PRJNA414229 | ENA
Genomics miRNA expression profiling of hTERT-immortalized renal proximal tubule epithelial (RPTEC/TERT1) cell treated with mesenchymal stem cell-conditioned miedium (BMSC-CM) on polyacrylamide (PAA) gel platform
2023-12-20 | GSE250271 | GEO
Transcriptomics Transcription profiling by array of mouse peripheral blood mononuclear cells from ApoE3*Leiden mice on a high-fat diet
2011-04-01 | E-TABM-959 | biostudies-arrayexpress
Proteomics In-depth proteome profiling of kidney in 5/6 Nephrectomy rat model
2021-01-19 | PXD016447 | Pride
Genomics
| PRJNA482006 | ENA