Unknown,Transcriptomics,Genomics,Proteomics

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High resolution genome-wide mapping of HIF binding sites by ChIP-seq


ABSTRACT: We report ChIP-Seq analysis of HIF-1 alpha, HIF-2 alpha, and HIF-1 beta binding in MCF-7 breast cancer cells Sample analysis compared to pre-immune serum chromatin immunoprecipitation

ORGANISM(S): Homo sapiens

SUBMITTER: David Mole 

PROVIDER: E-GEOD-28352 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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High-resolution genome-wide mapping of HIF-binding sites by ChIP-seq.

Schödel Johannes J   Oikonomopoulos Spyros S   Ragoussis Jiannis J   Pugh Christopher W CW   Ratcliffe Peter J PJ   Mole David R DR  

Blood 20110329 23


Hypoxia-inducible factor (HIF) regulates the major transcriptional cascade central to the response of all mammalian cells to alterations in oxygen tension. Expression arrays indicate that many hundreds of genes are regulated by this pathway, controlling diverse processes that in turn orchestrate both oxygen delivery and utilization. However, the extent to which HIF exerts direct versus indirect control over gene expression together with the factors dictating the range of HIF-regulated genes rema  ...[more]

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