Unknown,Transcriptomics,Genomics,Proteomics

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[E-MTAB-366] Transcription profiling by array of chicken embryos at 15 different stages


ABSTRACT: Transcription profiling of chicken development The experiment were perfomed as a part of our Vertebrate Evo-Devo project. The aim of the project is to compare transcription profiles of normal (unmanipulated, wild-type, whole embryo) vertebrate embryos. Total RNA was collected from wild type G.gallus whole embryos at 15 different stages (Stages:HH1,2,4,6,8,9,11,14,16,19,24,27,32,34,38), and hybridized to the Affymetrix Chicken Genome Array. All the stages contains data from two biological replications. Each staged-samples consists of pooled total RNA from several whole embryos.

ORGANISM(S): Gallus gallus

SUBMITTER: Naoki Irie 

PROVIDER: E-GEOD-28388 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis.

Irie Naoki N   Kuratani Shigeru S  

Nature communications 20110101


One of the central issues in evolutionary developmental biology is how we can formulate the relationships between evolutionary and developmental processes. Two major models have been proposed: the 'funnel-like' model, in which the earliest embryo shows the most conserved morphological pattern, followed by diversifying later stages, and the 'hourglass' model, in which constraints are imposed to conserve organogenesis stages, which is called the phylotypic period. Here we perform a quantitative co  ...[more]

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