Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

CNV analysis for Generation of isogenic pluripotent stem cells differing exclusively at two early onset Parkinson point mutations


ABSTRACT: Patient-specific induced pluripotent stem cells (iPSCs) derived from somatic cells provide a unique tool for the study of human disease in disease relevant cells, as well as a promising source for cell replacement therapies for degenerative diseases. However one of the crucial limitations before realizing the full promise of this “disease in a dish” approach has been the inability to do controlled experiments under genetically defined conditions. This is particularly relevant for disorders with long latency periods, such as Parkinson’s disease (PD), where in vitro phenotypes of patient-derived iPSCs are predicted to be subtle and susceptible to significant epistatic effects of genetic background variations. By combining zinc-finger nuclease (ZFN)-mediated genome editing and iPSC technology we provide a generally applicable solution to this key problem by generating isogenic pairs of disease and control human embryonic stem cells (hESCs) and hiPSCs lines that differ exclusively at a susceptibility variant for PD by modifying a single point mutation (A53T) in the ?-synuclein gene. The robust capability to genetically correct disease causing point mutations in patient-derived hiPSCs represents not only a significant progress for basic biomedical research but also a major advancement towards hiPSC-based cell replacement therapies using autologous cells. ZFN-mediated genome edited human iPS cells or ES cells were assayed for genomic variation

ORGANISM(S): Homo sapiens

SUBMITTER: Albert Cheng 

PROVIDER: E-GEOD-29772 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications


Patient-specific induced pluripotent stem cells (iPSCs) derived from somatic cells provide a unique tool for the study of human disease, as well as a promising source for cell replacement therapies. One crucial limitation has been the inability to perform experiments under genetically defined conditions. This is particularly relevant for late age onset disorders in which in vitro phenotypes are predicted to be subtle and susceptible to significant effects of genetic background variations. By com  ...[more]

Similar Datasets

2011-07-25 | E-GEOD-29773 | biostudies-arrayexpress
2011-07-26 | GSE29773 | GEO
2011-07-26 | GSE29772 | GEO
2009-03-06 | GSE14711 | GEO
2022-12-31 | GSE118511 | GEO
2023-03-17 | E-MTAB-11604 | biostudies-arrayexpress
2011-01-31 | E-GEOD-26173 | biostudies-arrayexpress
2015-02-28 | GSE66337 | GEO
2010-10-20 | E-GEOD-22792 | biostudies-arrayexpress
2013-12-05 | E-GEOD-46798 | biostudies-arrayexpress