Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Clostridium difficile mutant ccpA CD630E JIR8094: growth 10h with 0.5% glucose in TY vs growth 10h in TY

ABSTRACT: transcriptionnal profiling of a ccpA mutant of C. difficile strain JIR8094 comparing growth 10h in 0.5% TY medium with growth 10h in TY medium two-conditions experiments, 0.5% glucose TY for 10h vs TY for 10h, 4 biological replicates for each condition, in an indirect design using a 8h TY RNA preparation as Reference

ORGANISM(S): [Clostridium] difficile

SUBMITTER: Monot Marc 

PROVIDER: E-GEOD-35073 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Json Xml
altmetric image

Publications

Global transcriptional control by glucose and carbon regulator CcpA in Clostridium difficile.

Antunes Ana A   Camiade Emilie E   Monot Marc M   Courtois Emmanuelle E   Barbut Frédéric F   Sernova Natalia V NV   Rodionov Dmitry A DA   Martin-Verstraete Isabelle I   Dupuy Bruno B  

Nucleic acids research 20120918 21

The catabolite control protein CcpA is a pleiotropic regulator that mediates the global transcriptional response to rapidly catabolizable carbohydrates, like glucose in Gram-positive bacteria. By whole transcriptome analyses, we characterized glucose-dependent and CcpA-dependent gene regulation in Clostridium difficile. About 18% of all C. difficile genes are regulated by glucose, for which 50% depend on CcpA for regulation. The CcpA regulon comprises genes involved in sugar uptake, fermentation  ...[more]

Similar Datasets

Transcriptomics Clostridium difficile CD630E JIR8094: growth 10h with 0.5% glucose in TY vs growth 10h in TY
2012-10-02 | E-GEOD-35072 | biostudies-arrayexpress
Transcriptomics Comparison of the expression profiles of 630E JIR8094 strain and a ccpA mutant after 10h of growth in TY with 0.5% glucose.
2012-10-02 | E-GEOD-35070 | biostudies-arrayexpress
Transcriptomics Comparison of the expression profiles of 630E JIR8094 strain and a ccpA mutant
2012-10-02 | E-GEOD-35152 | biostudies-arrayexpress
Transcriptomics Comparison of the expression profiles of 630E JIR8094 strain and a ccpA mutant after 10h of growth in TY.
2012-10-02 | E-GEOD-35071 | biostudies-arrayexpress
Transcriptomics Clostridium difficile CD630E JIR8094: growth 10h with 0.5% glucose in TY vs growth 10h in TY
2012-10-02 | GSE35072 | GEO
Transcriptomics Clostridium difficile mutant ccpA CD630E JIR8094: growth 10h with 0.5% glucose in TY vs growth 10h in TY
2012-10-02 | GSE35073 | GEO
Transcriptomics Comparison of the expression profiles of 630E strain and a sigH mutant after 10h of growth
2011-08-21 | E-GEOD-25475 | biostudies-arrayexpress
Transcriptomics Comparison of the expression profiles of 630E JIR8094 strain and a ccpA mutant after 10h of growth in TY.
2012-10-02 | GSE35071 | GEO
Transcriptomics Comparison of the expression profiles of 630E strain after 4h and 10h of growth
2011-08-21 | E-GEOD-25474 | biostudies-arrayexpress
Transcriptomics Comparison of the expression profiles of 630E JIR8094 strain and a ccpA mutant after 10h of growth in TY with 0.5% glucose.
2012-10-02 | GSE35070 | GEO