Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Transcription start site analysis for Thermotoga maritima [RNA-seq]

ABSTRACT: Investigation of 5' transcripts using strand specific sequencing for T. maritima under logphase, maltose minimal media growth conditions Two replicate samples were sequenced after isolating total RNA of cultures grown in maltose minimal media. Cells were harvested in logphase growth.

ORGANISM(S): Thermotoga maritima MSB8

SUBMITTER: Haythem Latif 

PROVIDER: E-GEOD-37461 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Json Xml
altmetric image

Publications

The generation of genome-scale data is becoming more routine, yet the subsequent analysis of omics data remains a significant challenge. Here, an approach that integrates multiple omics datasets with bioinformatics tools was developed that produces a detailed annotation of several microbial genomic features. This methodology was used to characterize the genome of Thermotoga maritima--a phylogenetically deep-branching, hyperthermophilic bacterium. Experimental data were generated for whole-genome  ...[more]

Similar Datasets

Transcriptomics Transcriptome analysis of Thermotoga maritima under multiple growth conditions [tiling array]
2013-08-02 | E-GEOD-37391 | biostudies-arrayexpress
Transcriptomics Transcriptome analysis of Thermotoga maritima
2013-08-02 | E-GEOD-37483 | biostudies-arrayexpress
Transcriptomics Thermotoga maritima wild type minimal media expression analysis
2012-07-02 | E-GEOD-28822 | biostudies-arrayexpress
Transcriptomics Genome-wide transcription start site determination of Geobacter sulfurreducens under multiple growth conditions
2010-07-01 | E-GEOD-22511 | biostudies-arrayexpress
Transcriptomics The metabolic and regulatory networks of carbohydrate utilization of Thermotoga maritima
2013-08-02 | E-GEOD-47615 | biostudies-arrayexpress
Transcriptomics Analysis of Geobacter sulfurreducens under multiple growth conditions
2010-06-30 | E-GEOD-22512 | biostudies-arrayexpress
Transcriptomics RNA-seq of coding RNA of Actinoplanes sp. SE50/110 to analyze gene function of alternative sigma factor gene ACSP50_0507
2024-07-22 | E-MTAB-13644 | biostudies-arrayexpress
Transcriptomics Growth in minimal media with maltose
2006-05-20 | GSE4876 | GEO
Transcriptomics Growth in minimal media with maltose
2006-05-20 | E-GEOD-4876 | biostudies-arrayexpress
Transcriptomics Transcription start site analysis for Thermotoga maritima [RNA-seq]
2013-08-02 | GSE37461 | GEO