Unknown,Transcriptomics,Genomics,Proteomics

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Expression data of cystic fibrosis and non-cystic fibrosis airway cell lines under oxidative stress


ABSTRACT: CF's physiopathology is poorly explained by the mutation alone. The oxydative stress could be a major factor of this illness . Study its impact on transcriptome's CF cell line could be ameliorate our understanding of the evolution of cystic fibrosis. we used microarray technology to evaluate under oxydative stress, the transcriptional state of an epithelial lung cell issued from a human with cystic fibrosis and to identify a set of modulated genes associated to survival cell processes. the two cell lines are cultivated to Air-liquid Interface for RNA extraction and hybridization on Affymetrix microarrays. Each condition is triplicated. For the oxidative stress conditions, the two cell lines are treated on apical site by 15 µl of DMNQ (2,3-dimethoxy-1,4-naphtoquinone) ,concentrated at 15 µM, during 24 hours before RNA extraction.

ORGANISM(S): Homo sapiens

SUBMITTER: greg Voisin 

PROVIDER: E-GEOD-39843 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Oxidative stress modulates the expression of genes involved in cell survival in ΔF508 cystic fibrosis airway epithelial cells.

Voisin Grégory G   Bouvet Guillaume F GF   Legendre Pierre P   Dagenais André A   Massé Chantal C   Berthiaume Yves Y  

Physiological genomics 20140603 17


Although cystic fibrosis (CF) pathophysiology is explained by a defect in CF transmembrane conductance regulator (CFTR) protein, the broad spectrum of disease severity is the consequence of environmental and genetic factors. Among them, oxidative stress has been demonstrated to play an important role in the evolution of this disease, with susceptibility to oxidative damage, decline of pulmonary function, and impaired lung antioxidant defense. Although oxidative stress has been implicated in the  ...[more]

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