Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Genome-Wide Progesterone Receptor Binding: Cell Type-Specific and Shared Mechanisms in Uterine Fibroids and Breast Cancer (Expression BeadChip)


ABSTRACT: Analysis of genes regulated by RU486 (an progesterone antagonist) in human breast cancer T47D cells and human uterine leiomyoma smooth muscle cells. The hypothesis is that RU486 inhibits tumor growth by inactivating the transcription of multiple genes which trigger critical signaling pathways to induce tumorigenesis in both breast caner and uterine leomyoma. Tissue-specific and common patterns of gene regulation may determine the therapeutic effects of antiprogestins in uterine leiomyoma and breast cancer. Keywords: Expression profiling by array Total RNA isolated from T47D cells subjected to RU486 treatment for 6 hours compared to vehicle (ethanol) treated cells. Total RNA isolated from uterine leiomyoma cells subjected to RU486 treatment for 6 hours compared to vehicle (ethanol) treated cells.

ORGANISM(S): Homo sapiens

SUBMITTER: Damian Roqueiro 

PROVIDER: E-GEOD-40725 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Genome-wide progesterone receptor binding: cell type-specific and shared mechanisms in T47D breast cancer cells and primary leiomyoma cells.

Yin Ping P   Roqueiro Damian D   Huang Lei L   Owen Jonas K JK   Xie Anna A   Navarro Antonia A   Monsivais Diana D   Coon John S JS   Kim J Julie JJ   Dai Yang Y   Bulun Serdar E SE  

PloS one 20120117 1


<h4>Background</h4>Progesterone, via its nuclear receptor (PR), exerts an overall tumorigenic effect on both uterine fibroid (leiomyoma) and breast cancer tissues, whereas the antiprogestin RU486 inhibits growth of these tissues through an unknown mechanism. Here, we determined the interaction between common or cell-specific genome-wide binding sites of PR and mRNA expression in RU486-treated uterine leiomyoma and breast cancer cells.<h4>Principal findings</h4>ChIP-sequencing revealed 31,457 and  ...[more]

Similar Datasets

2011-07-22 | E-GEOD-30871 | biostudies-arrayexpress
2012-09-11 | E-GEOD-40724 | biostudies-arrayexpress
2012-09-11 | GSE40724 | GEO
2012-09-11 | GSE40725 | GEO
2013-09-01 | E-GEOD-45187 | biostudies-arrayexpress
2011-01-05 | E-GEOD-23893 | biostudies-arrayexpress
2012-04-30 | E-GEOD-19477 | biostudies-arrayexpress
2012-04-09 | E-GEOD-37122 | biostudies-arrayexpress
2014-08-14 | GSE52618 | GEO
2016-08-15 | PXD004170 | Pride