Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Transcription profiling of human cell lines freely cycling treated with 164 distinct small molecules - Broad Connectivity Map CMAP Set 1


ABSTRACT: A reference collection of genome-wide transcriptional expression data for bioactive small molecules. Experiment Overall Design: The current collection (build01) contains data for 164 distinct small molecules applied to freely cycling human cell lines, represented by 453 individual treatment and matched vehicle control pairs.

ORGANISM(S): Homo sapiens

SUBMITTER: Justin Lamb 

PROVIDER: E-GEOD-5258 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications


To pursue a systematic approach to the discovery of functional connections among diseases, genetic perturbation, and drug action, we have created the first installment of a reference collection of gene-expression profiles from cultured human cells treated with bioactive small molecules, together with pattern-matching software to mine these data. We demonstrate that this "Connectivity Map" resource can be used to find connections among small molecules sharing a mechanism of action, chemicals and  ...[more]

Similar Datasets

2006-09-27 | GSE5258 | GEO
| PRJNA994878 | ENA
2024-07-08 | GSE271635 | GEO
| PRJNA635425 | ENA
| PRJNA552537 | ENA
| EGAS00001005515 | EGA
2015-05-18 | E-GEOD-50469 | biostudies-arrayexpress
| 2623816 | ecrin-mdr-crc
| PRJNA671246 | ENA
2015-05-18 | GSE50469 | GEO