Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of human cell lines freely cycling treated with 164 distinct small molecules - Broad Connectivity Map CMAP Set 1


ABSTRACT: A reference collection of genome-wide transcriptional expression data for bioactive small molecules. Experiment Overall Design: The current collection (build01) contains data for 164 distinct small molecules applied to freely cycling human cell lines, represented by 453 individual treatment and matched vehicle control pairs.

ORGANISM(S): Homo sapiens

SUBMITTER: Justin Lamb 

PROVIDER: E-GEOD-5258 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications


To pursue a systematic approach to the discovery of functional connections among diseases, genetic perturbation, and drug action, we have created the first installment of a reference collection of gene-expression profiles from cultured human cells treated with bioactive small molecules, together with pattern-matching software to mine these data. We demonstrate that this "Connectivity Map" resource can be used to find connections among small molecules sharing a mechanism of action, chemicals and  ...[more]

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