Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Transcription profiling of human A549 cell line treated with type I and II interferons vs. controls


ABSTRACT: Type I and type II interferons (IFNs) bind to different cell surface receptors but activate overlapping signal transduction pathways. We examined the effects of a type I IFN (IFN-acon1) and a type II iFN (IFN-g1b) on gene experession in A549 cells and demonstrate that there is a common set of genes modulated by both IFNs as well as a set of gene specifically regulated by each, reflecting the activation of different signaling pathways. In particualr, IFN-g induced many more genes of the signaling pathways, apoptosis, and cytokine interactions than did IFN-a. Even with genes induced by both IFNs there were distinctive quantitativive differences in expression. IFN-g1b plays a major role in the induction and regulation of the complement pathway. Previous work has shown a synergistic antivral and antiproliferative effect of type I and type II IFNs in cell culture and in the treament of tumors in mice. We demonstrate that a majority of genes showed and additive effect of IFN-acon1 and IFN-g1b, but a subset of gene is synergistically induced; these incluce ISG10, MX2, OAS2, and other genes known to be involved in the antiviral response, TRAIL (TNFSF10) and caspases involved in apoptosis and chemokine genes RANTES, CXCL10, and CXCL11. Greater than additive transcription of some of these genes in the presence of both IFNs was confirmed by real-time kinetic RT-PCR. Elevated induction of many of these genes may be sufficient to explain the synergistic antiviral and antitumor effects of this combination of IFNS in vivo.

ORGANISM(S): Homo sapiens

SUBMITTER: Milton Taylor 

PROVIDER: E-GEOD-5542 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Differential gene induction by type I and type II interferons and their combination.

Sanda Corneliu C   Weitzel Patrick P   Tsukahara Takuma T   Schaley Joel J   Edenberg Howard J HJ   Stephens Matthew A MA   McClintick Jeanette N JN   Blatt Lawrence M LM   Li Lang L   Brodsky Leonid L   Taylor Milton W MW  

Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research 20060701 7


Type I and type II interferons (IFNs) bind to different cell surface receptors but activate overlapping signal transduction pathways. We examined the effects of a type I IFN (IFN-alphacon1) and a type II IFN (IFN-gamma1b) on gene expression in A549 cells and demonstrate that there is a common set of genes modulated by both IFNs as well as a set of genes specifically regulated by each, reflecting the activation of different signaling pathways. In particular, IFN-gamma induced many more genes of t  ...[more]

Similar Datasets

2006-08-15 | GSE5542 | GEO
2011-01-19 | E-GEOD-25113 | biostudies-arrayexpress
2022-02-09 | PXD026079 | Pride
2010-05-18 | E-GEOD-15193 | biostudies-arrayexpress
2021-11-28 | GSE189613 | GEO
2022-04-13 | GSE193088 | GEO
2021-09-08 | GSE183474 | GEO
2011-01-19 | GSE25113 | GEO
2023-01-19 | PXD037759 | Pride
2019-09-30 | GSE115198 | GEO