Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Molecular Signature of Erythroblast Enucleation in Human Embryonic Stem Cells


ABSTRACT: While enucleation is a critical step in the terminal differentiation of human red blood cells, the molecular mechanisms underlying this unique process remain unclear. To investigate erythroblast enucleation, we studied the erythroid differentiation of human embryonic stem cells (hESCs), which provide a unique model for deeper understanding of the development and differentiation of multiple cell types. First, using a two-step protocol, we demonstrated that terminal erythroid differentiation from hESCs is directly dependent on the age of the embryoid bodies. Second, by choosing hESCs in two extreme conditions of erythroid culture, we obtained an original differentiation model which allows one to study the mechanisms underlying the enucleation of erythroid cells by analyzing the gene and miRNA (miR) expression profiles of cells from these two culture conditions. Third, using an integrated analysis of mRNA and miR expression profiles, we identified five miRs potentially involved in erythroblast enucleation. Finally, by selective knockdown of these five miRs we found miR-30a to be a regulator of erythroblast enucleation in hESCs. We compared the miRNA expression profles of sample groupe A (EB9) to sample goupe B (EB20). Microarray analysis was performed in triplicate for both sample groups at each time point: Day0, cells at the level of embryoid body (A-D0, B-D0) and Day18 of erythroid culture(A-D18, B-D18).

ORGANISM(S): synthetic construct

SUBMITTER: Hélène LAPILLONNE 

PROVIDER: E-GEOD-55530 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

altmetric image

Publications

Molecular signature of erythroblast enucleation in human embryonic stem cells.

Rouzbeh Shaghayegh S   Kobari Ladan L   Cambot Marie M   Mazurier Christelle C   Hebert Nicolas N   Faussat Anne-Marie AM   Durand Charles C   Douay Luc L   Lapillonne Hélène H  

Stem cells (Dayton, Ohio) 20150513 8


While enucleation is a critical step in the terminal differentiation of human red blood cells, the molecular mechanisms underlying this unique process remain unclear. To investigate erythroblast enucleation, we studied the erythroid differentiation of human embryonic stem cells (hESCs), which provide a unique model for deeper understanding of the development and differentiation of multiple cell types. First, using a two-step protocol, we demonstrated that terminal erythroid differentiation from  ...[more]

Similar Datasets

2015-04-14 | E-GEOD-55532 | biostudies-arrayexpress
2015-04-14 | E-GEOD-55531 | biostudies-arrayexpress
2015-04-14 | GSE55531 | GEO
2015-04-14 | GSE55530 | GEO
2015-04-14 | GSE55532 | GEO
2010-10-13 | E-GEOD-18558 | biostudies-arrayexpress
2010-10-13 | GSE18558 | GEO
2013-10-31 | E-GEOD-51960 | biostudies-arrayexpress
2013-10-31 | GSE51960 | GEO
2013-10-31 | E-GEOD-32991 | biostudies-arrayexpress