Unknown,Transcriptomics,Genomics,Proteomics

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Insights into the epigenomic landscape of the human malaria vector Anopheles gambiae


ABSTRACT: We characterize the epigenome of the human malaria vector Anopheles gambiae in midgut cells by mapping the distribution and levels of two post-translational histone modifications, H3K27ac and H3K27me3. These histone profiles were then correlated with levels of gene expression obtained by RNA-seq. ChIP-seq and RNA-seq were performed on adult female A. gambiae midguts. RNA-seq was performed on adult female A. gambiae salivary glands.

ORGANISM(S): Anopheles gambiae

SUBMITTER: Elena Gomez-Diaz 

PROVIDER: E-GEOD-59773 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Insights into the epigenomic landscape of the human malaria vector Anopheles gambiae.

Gómez-Díaz Elena E   Rivero Ana A   Chandre Fabrice F   Corces Victor G VG  

Frontiers in genetics 20140815


The epigenome of the human malaria vector Anopheles gambiae was characterized in midgut cells by mapping the distribution and levels of two post-translational histone modifications, H3K27ac and H3K27me3. These histone profiles were then correlated with levels of gene expression obtained by RNA-seq. Analysis of the transcriptome of A. gambiae midguts and salivary glands led to the discovery of 13,898 new transcripts not present in the most recent genome assembly. A subset of these transcripts is  ...[more]

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