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Human Herpesvirus 6A encoded miRNAs: A role in viral lytic replication

ABSTRACT: We report the application of size selection of small RNA species isolated from Jjhan cells harboring the human herpesvirus 6A genome. We ammassed >3.4million reads of sequence from three different sources: Normal Brain cell total RNA, Jjhan total RNA and HHV-6A BAC transfected Jjhan total RNA. Sequences were mapped to the HHV-6A Uganda 1102 strain genome (GenBank: X83413.1) with no less than 100% match for reads >20nt and <23nt. The resulting pool of candidates was mapped to the HHV-6A genome. Single pass 36nt sequencing of samples either with or without HHV-6a genomes present.

ORGANISM(S): Homo sapiens

SUBMITTER: Eain Murphy

PROVIDER: E-GEOD-62233 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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