Unknown,Transcriptomics,Genomics,Proteomics

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Defective structural RNA processing in relapsing-remitting multiple sclerosis


ABSTRACT: It is fundamentally unknown how normal cellular processes or responses to extracellular stimuli may invoke polyadenylation and degradation of ncRNA substrates or if human disease processes exhibit defects in polyadenylation of ncRNA substrates as part of their pathogenesis. Our results demonstrate that mononuclear cells from subjects with relapsing-remitting multiple sclerosis (RRMS) exhibit pervasive increases in levels of polyadenylated ncRNAs including Y1 RNA, 18S and 28S rRNA, and U1, U2, and U4 snRNAs and these defects are unique to RRMS. Defects in expression of both Ro60 and La proteins in RRMS appear to contribute to increased polyadenylation of ncRNAs. Further, IFN-β1b, a common RRMS therapy, restores both Ro60 and La levels to normal as well as levels of polyadenylated Y1 RNA and U1 snRNA suggesting that aberrant polyadenylation of ncRNA substrates may have pathogenic consequences. We extracted RNA from peripheral whole blood in healthy control subjects and patients with established relapsing-remitting multiple sclerosis using PaxGene tubes.

ORGANISM(S): Homo sapiens

SUBMITTER: Charles Spurlock III 

PROVIDER: E-GEOD-66573 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Defective structural RNA processing in relapsing-remitting multiple sclerosis.

Spurlock Charles F CF   Tossberg John T JT   Guo Yan Y   Sriram Subramaniam S   Crooke Philip S PS   Aune Thomas M TM  

Genome biology 20150325


<h4>Background</h4>Surveillance of integrity of the basic elements of the cell including DNA, RNA, and proteins is a critical element of cellular physiology. Mechanisms of surveillance of DNA and protein integrity are well understood. Surveillance of structural RNAs making up the vast majority of RNA in a cell is less well understood. Here, we sought to explore integrity of processing of structural RNAs in relapsing remitting multiple sclerosis (RRMS) and other inflammatory diseases.<h4>Results<  ...[more]

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