Browse
Submit Data
Databases
API
Help

Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

CrpD2 mutant vs Shewanella piezotolerans WP3 wild-type strain

ABSTRACT: The DNA binding domain of crp gene was deleted from WP3 genome to construct the WP3?crpD2 strain. The two strains were cultured at 20°C and the transcriptional profiles were compared. Three biological replicates sample and 6 technical replicates for each experiment

ORGANISM(S): Shewanella piezotolerans WP3

SUBMITTER: Huahua Jian

PROVIDER: E-GEOD-67732 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

crpD1 mutant vs Shewanella piezotolerans WP3 wild-type strain

Project description:The cAMP binding domain of crp gene was deleted from WP3 genome to construct the WP3?crpD1 strain. The two strains were cultured at 20°C and the transcriptional profiles were compared. Three biological replicates sample and 6 technical replicates for each experiment

2015-04-10 | E-GEOD-67731 | biostudies-arrayexpress

hns mutant vs Shewanella piezotolerans WP3 wild-type strain 20C

Project description:The hns gene was deleted from WP3 genome to construct the WP3M-NM-^Thns strain. The two strains were cultured at 20M-BM-0C and the transcriptional profiles were compared. Three biological replicates sample and 6 technical replicates for each experiment

2014-07-01 | E-GEOD-57905 | biostudies-arrayexpress

hns mutant vs Shewanella piezotolerans WP3 wild-type strain 4C

Project description:The hns gene was deleted from WP3 genome to construct the WP3M-NM-^Thns strain. The two strains were cultured at 4M-BM-0C and the transcriptional profiles were compared. Three biological replicates sample and 6 technical replicates for each experiment

2014-07-01 | E-GEOD-57877 | biostudies-arrayexpress

SW1 mutant vs Shewanella piezotolerans WP3 wild-type strain

Project description:The prophage and RF DNA of SW1 were removed from WP3 to construct the phage-free strain. The two strains were cultured at 20MPa and 4M-BM-0C and the transcriptional profiles were compared. Three biological replicates sample and 6 technical replicates for each experiment

2015-03-04 | E-GEOD-66462 | biostudies-arrayexpress

Shewanella piezotolerans WP3 wild-type strain heat shock for 30 min

Project description:The WP3 strains was cultured at 20Â°C and heat shocked at 40Â°C for 30 min. The transcriptional profiles after and before heat shock were compared. Three biological replicates sample and 6 technical replicates for each experiment

2016-06-15 | E-GEOD-82261 | biostudies-arrayexpress

Shewanella piezotolerans WP3 wild-type strain heat shock for 90 min

Project description:The WP3 strains was cultured at 20Â°C and heat shocked at 40Â°C for 90 min. The transcriptional profiles after and before heat shock were compared. Three biological replicates sample and 6 technical replicates for each experiment

2016-06-15 | E-GEOD-82263 | biostudies-arrayexpress

Shewanella piezotolerans WP3 wild-type strain heat shock for 60 min

Project description:The WP3 strains was cultured at 20Â°C and heat shocked at 40Â°C for 60 min. The transcriptional profiles after and before heat shock were compared. Three biological replicates sample and 6 technical replicates for each experiment

2016-06-15 | E-GEOD-82262 | biostudies-arrayexpress

hns mutant vs Shewanella piezotolerans WP3 wild-type strain 4C and 20C

Project description:This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

2014-07-01 | E-GEOD-57940 | biostudies-arrayexpress

SW1 mutant vs. Shewanella piezotolerans WP3 wild-type strain

Project description:The prophage and RF DNA of SW1 were removed from WP3 to construct the phage-free strain. The two strains were cultured at 4M-BM-0C and the transcriptional profiles were compared. WP3M-NM-^TSW1 is the test sample and WP3 wild-type is the reference sample. Three independent cultures were used for RNA extraction, and the RNA samples were combined into one sample for microarray. Each microarray slide has 3 spots for a single gene, and as dye-swaps were performed, 6 spots were used to determine the expression level of one gene.

2013-01-30 | E-GEOD-43882 | biostudies-arrayexpress

Shewanella piezotolerans WP3 wild-type strain under heat shock

Project description:This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

2016-06-15 | E-GEOD-82264 | biostudies-arrayexpress