Browse
Submit Data
Databases
API
Help

Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

40 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcription profiling in Populus euphratica cob roots

ABSTRACT: Comparison of P.euphratica cob roots developed under high NaCl concentrations with roots of control plants

ORGANISM(S): Populus euphratica

SUBMITTER: Dennis Janz

PROVIDER: E-MEXP-2234 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Transcription profiling of Populus trichocarpa leaves in response to species diversity levels

Project description:Changes in gene expression in P. trichocarpa leaves was measured in response to growth competition by P. x canescens.Square petri dishes (12 x 12 cm) were filled autoclaved sand, 3 plantlets and Woody Plant Medium (WPM). In each petri dish we are growing 3 plantlets. As control 3 plantlets of P. trichocarpa and for the experiment a mixture of P. canescens and P. trichocarpa were P. trichocarpa is all the time the middle plantlet.

2015-05-22 | E-MEXP-3910 | biostudies-arrayexpress

Transcription profiling of Populus trichocarpa roots in response to species diversity levels

2015-05-22 | E-MEXP-3909 | biostudies-arrayexpress

Transcription profiling by array of Medicago truncatula border cells, root tips and whole roots

Project description:To better understand the spatial distribution of gene expression network in legume roots, transcriptomics profiles of border cells, root tips and whole roots were compared.

2011-08-20 | E-MEXP-2883 | biostudies-arrayexpress

Transcription profiling of Populus x canescens fine roots inoculated with Paxillus involutus in response to salt stress

Project description:Populus x canescens was inoculated with Paxillus involutus and grown in a climate chamber for 13 weeks. Afterwards, plants were salt stressed for 18 additional days with 150 mM NaCl in the nutrient solution. This resulted in 4 different treatments: no mycorrhiza<br>control (NC), mycorrhiza/control (MC), no mycorrhiza/salt (NS), mycorrhiza/salt (MS).

2009-09-16 | E-MEXP-1874 | biostudies-arrayexpress

Transcription profiling of Populus x canescens and Populus euphratica developing xylem under salt stress to study mechanisms of stress adaption and tolerance in wood

Project description:Changes in gene expression in P. x canescens and P. euphratica in response to salt stress

2010-03-02 | E-MEXP-2031 | biostudies-arrayexpress

Transcription profiling of Populus x canescens and P. euphratica

Project description:Comparison of transcriptional states of Populus x canescens and P. euphratica under control conditions

2009-10-27 | E-MEXP-1928 | biostudies-arrayexpress

Transcription profiling by array of Arabidopsis wild type and an ARF7/ARF19 double knockout mutant roots dissected into 5 developmental zones

Project description:Arabidopsis seedlings, of both wild-type and an ARF7/ARF19 double knockout mutant, were grown to 7 days post-germination. The roots were then dissected into 5 developmental zones, the meristem, early elongation zone, late elongation zone, mature root and lateral root zone. The sections then underwent transcriptional profiling to identify processes and regulatory events specific and in common to the zones.

2011-04-13 | E-MEXP-2912 | biostudies-arrayexpress

Medicago truncatula and Macrophomina phaseolina interaction

Project description:This experiment was designed to study the interactions between Medicago truncatula and the charcoal rot pathogen Macrophomina phaeolina. Two-week-old plants grown in Magenta boxes supplied with 1/2 MS salt and 1% sucrose were inoculated with M. phaseolina covered wheat seeds, and roots were harvested at 24, 36 and 48 hours after inoculation. Control plants were mock inoculated with a sterile wheat seed, and roots were harvest 24 hours later. Pooled RNAs were used in the array experiment using Affymetrix GeneChip(r) Medicago Genome Array.

2012-05-15 | E-MEXP-3580 | biostudies-arrayexpress

Transcription profiling of Medicago truncatula with benzylaminopurine treatment to the root tips and untreated control plants

Project description:A BAP (benzylaminopurine, cytokinin) solution (10-7 M) was applied to root tips of Medicago truncatula (Jemalong A17 genotype) for 1h. Microarrays were used to compare the transcriptome of these plants (4 replicates) with the transcriptome of control plants, not exposed to BAP (4 replicates)

2010-01-01 | E-MEXP-1442 | biostudies-arrayexpress

Transcription profiling of Medicago truncatula after salt stress treatment to the root tips and untreated control plants

Project description:A Salt stress (100mM) was applied to root tips of Medicago truncatula (Jemalong A17 genotype) for 1h. Microarrays were used to compare the transcriptome of these plants (4 replicates) with the transcriptome of control plants, not submitted to the salt stress (4 replicates)

2009-01-14 | E-MEXP-1441 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data