Browse
Submit Data
Databases
API
Help

Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcription profiling of Arabidopsis cells treated with hydrogen peroxide for different lengths of time to investigate the involvement of small non-coding RNAs in responses to oxidative stress

ABSTRACT: Arabidopsis cells (5 days after subculturing) were cultured at 21°C, 8 h photoperiod under agitation. H2O2 2.5 µM was added to cells 5 days after subculturing and 2 hours after the beginning of the light period. Treated and control cells were collected 15 min, 1 h, 5 h and 12 h after treatment.

INSTRUMENT(S): Axon GenePix 4000A scanning hardware

ORGANISM(S): Arabidopsis thaliana

SUBMITTER: Olivier Pichon

PROVIDER: E-MEXP-395 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Transcription profiling of wild type and Kdo Transferase mutant Arabidposis plants to investigate the effects on cell-wall biosynthesis

Project description:Comparison of RNA levels between wild type and a Kdo Transferase mutant in Arabidopsis thaliana. We are interested by the cell-wall biosyntheis in the Arabidopsis thaliana plants which are affected in Kdo biosynthesis.

2007-03-23 | E-MEXP-798 | biostudies-arrayexpress

Transcription profiling of Arabidopsis mgo3 mutant leaves

Project description:Identification of molecular target of MGO3 genes. 2 first leaves of mgo3-2 mutant or wild-type plants (WS ecotype) were harvested from plants grown during 2 weeks in vitro on MS medium in long days conditions. 3 repeats have been done for each samples

2005-04-26 | E-MEXP-196 | biostudies-arrayexpress

Transcription profiling of tissue from different developmental stages and parts of Arabidopsis Col0 and Ler0 wild type and gcn2 mutant plants

Project description:1- Comparison of the transcriptome of two ecotypes (Col0 and Ler0): compare the transcriptome of ColO versus Ler0 for different tissues and developmental stages (seedlings 7 days, shoot 14 days, flowers, leafs 35 days)<br> 2- Impact of SINE RNA : Analyse the consequence of the expression of a SINE RNA in Arabidopsis thaliana<br> 3- Impact of the gcn2 mutation : Impact of the gcn2 mutation on the Arabidopsis thaliana transcriptome. GCN2 is a kinase potentially regulated by the SINE non-coding RNA

2007-07-16 | E-MEXP-800 | biostudies-arrayexpress

Transcription profiling of Arabidopsis SET mutants

Project description:transcriptom profiling in Arabidopsis mutants

2006-11-15 | E-MEXP-302 | biostudies-arrayexpress

Transcription profiling of Arabidopsis Cul3a-1 mutant and control plants during germination in far red light

Project description:Parallel germination of Cul3a-1 mutant and control plants in far red light.

2005-01-01 | E-MEXP-175 | biostudies-arrayexpress

Transcription profiling of Arabidopsis strain with T-DNA insertions in the HAF2 gene

Project description:T-DNA insertions in the HAF2 gene are characterised. The mutation of the gene induced production of pale young leaves. Genetic analysis showed that HAF2 is required for both phytochrome and cryptochrome signalling. Accordingly, light-inducible gene expression and CAB2 promoter activity were affected by the mutation. The present transcriptome analysis showed that the mutation affected about 9% of Arabidopsis genes in 14 day-old leaves.

2004-10-05 | E-MEXP-178 | biostudies-arrayexpress

Transcription profiling of Arabidopsis thaliana ecotype Col-0 vs Arabidopsis thaliana ecotype Ler, both grown to Boyes scale 1.04 performed at URGV

Project description:Technical replicates hybridisations using 1.04 Arabidopsis thaliana - columbia-0 plants :plants cultivated and RNA-extracted by VIB, amplified and hybridised at URGV. aVIB-Col_vs_aVIB-Col

2004-02-01 | E-CAGE-11 | biostudies-arrayexpress

Transcription profiling of Arabidopsis thaliana ecotype Col-0 vs Arabidopsis thaliana ecotype Ler, both grown to Boyes scale 1.04 performed at URGV

Project description:hybridisations using 1.04 Arabidopsis thaliana - columbia-0 and landsberg plants:plants cultivated and RNA-extracted by VIB, amplified and hybridised at URGV. aVIB-Ler_vs_aVIB-Col

2004-02-12 | E-CAGE-12 | biostudies-arrayexpress

Transcription profiling of Arabidopsis self vs self experiment Col-0 samples both grown to Boyes scale 1.04 performed at URGV

Project description:hybridisations using 1.04 Arabidopsis thaliana - columbia-0 plants :plants cultivated and RNA-extracted by VIB, amplified and hybridised at URGV (VIB-Col)and plants cultivated and RNA-extracted by URGV, amplified and hybridised at URGV (URGV-Col). aVIB-Col_vs_aURGV-Col

2004-01-12 | E-CAGE-13 | biostudies-arrayexpress

Transcription profiling of HCA (High Cambial Activity) Arabidopsis mutant

Project description:Comparison between wild type Wassilewskija (WS) Arabidopsis plants and HCA mutant 10 days after planting. 3 biological repetitions have been done.

2005-07-04 | E-MEXP-379 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data