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Transcription profiling of mouse samples of varying RNA concentration amounts and hybridization times on array quality and binding kinetics


ABSTRACT: Effect of varying RNA concentration amounts and hybridization times on array quality and binding kinetics.

ORGANISM(S): Mus musculus

SUBMITTER: Mario Medvedovic 

PROVIDER: E-MEXP-40 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Microarray results improve significantly as hybridization approaches equilibrium.

Sartor Maureen M   Schwanekamp Jennifer J   Halbleib Danielle D   Mohamed Ismail I   Karyala Saikumar S   Medvedovic Mario M   Tomlinson Craig R CR  

BioTechniques 20040501 5


Dual-channel long oligonucleotide microarrays are in widespread use. Although much attention has been given to proper experimental design and analysis regarding long oligonucleotide microarrays, relatively little information is available concerning the optimization of protocols. We carried out a series of microarray experiments designed to investigate the effects of different levels of target concentration and hybridization times using a long oligonucleotide library. Based on principles develope  ...[more]

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