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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Whole genome sequencing of TF-AID-mutagenized flies

ABSTRACT: In this study, we stably expressed TF-AID in the germline of Drosophila melanogaster to induce mutations around specific transcription factor binding sites across the genome. To identify the mutations, we sequenced: (1) individual flies from the TF-AID-expressing populations, sampled across generations and populations; (2) all the background stocks, including TF-AID stocks, NGT40, all balancers, and w1118; (3) 3rd-chromosome isogenic lines derived from TF-AID populations, with 2 flies per isogenic lines sequenced, as replicates; (4) flies from lines with eye phenotypes (pooling 6-12 flies per line) and their 3rd-chromosome isogenic descendants.

INSTRUMENT(S): NextSeq 500, NextSeq 2000

ORGANISM(S): Drosophila melanogaster

SUBMITTER: Charles Girardot

PROVIDER: E-MTAB-13796 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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