Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling by array of paired head and neck squamous cell carcinoma and normal mucosa samples


ABSTRACT: We studied overall difference in gene expression between head and neck squamous cell carcinoma tumours and normal mucosa. Samples were collected from patients during surgery and almost in all cases, paired samples were collected: tumour tissue and normal mucosa from the opposite side. Tumour samples were TNM staged by pathologist and tested for human papillomavirus infection (HPV) high-risk types 16 and 18 by PCR of E6 and E7 mRNA. If possible, patients were followed up and their disease-free and overall survival is available (up to 11 years after surgery).

INSTRUMENT(S): Illumina BeadArray Reader (part of Illumina BeadStation 500

ORGANISM(S): Homo sapiens

SUBMITTER: Karel Smetana 

PROVIDER: E-MTAB-8588 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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