Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

0

Comparative genomic hybridization of 26 serovars and strains of Salmonella spp. including many representatives of subspecies I, Arizona from subsp. IIIa, and S. bongori from subsp. V

ABSTRACT: This experiment set includes 64 arrays representing 26 serovars and strains of Salmonella spp. including many representatives of subspecies I, Arizona from subsp. IIIa, and S. bongori from subsp. V. The genomic DNA from all strains were labeled with Cy5 and hybridized against an equal amount (1.5 ug) of S. typhimurium SL1344 reference genomic DNA that was labeled with Cy3, all on an S. typhimurium SL1344 spotted DNA microarray. Most of the arrays are present in triplicate to account for variability in probe generation, hybridization, and slide quality. Several are represented in duplicate, and a few without any replicates.

ORGANISM(S): Salmonella enterica serovar Typhimurium

SUBMITTER: Janos Demeter 

PROVIDER: E-SMDB-1624 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

Json Xml
altmetric image

Publications

Genomic comparison of Salmonella enterica serovars and Salmonella bongori by use of an S. enterica serovar typhimurium DNA microarray.

Chan Kaman K   Baker Stephen S   Kim Charles C CC   Detweiler Corrella S CS   Dougan Gordon G   Falkow Stanley S  

Journal of bacteriology 20030101 2

The genus Salmonella consists of over 2,200 serovars that differ in their host range and ability to cause disease despite their close genetic relatedness. The genetic factors that influence each serovar's level of host adaptation, how they evolved or were acquired, their influence on the evolution of each serovar, and the phylogenic relationships between the serovars are of great interest as they provide insight into the mechanisms behind these differences in host range and disease progression.  ...[more]

Similar Datasets

Genomics Genomic comparison of Salmonella enterica serovars and Salmonella bongori
2005-11-04 | GSE3564 | GEO
Transcriptomics Genomic comparison of Salmonella enterica serovars and Salmonella bongori
2005-11-03 | E-GEOD-3564 | biostudies-arrayexpress
Genomics FabR ChIP-chip on Salmonella enterica subsp. enterica serovar Typhimurium SL1344
2014-12-31 | GSE52877 | GEO
Proteomics Comparative analysis of Salmonella Typhi, Paratyphi A, Enteritidis and Typhimurium core proteomes
2019-05-13 | PXD011154 | Pride
Transcriptomics Transcriptomic Comparison of Common Nontyphoidal Salmonella Serovars Provides Greater Resolution for Understanding Differences in Virulence
2020-05-21 | GSE150943 | GEO
Proteomics Comparison of Salmonella proteome between different serovars
2020-10-30 | PXD022254 |
Transcriptomics Analysis of bacterial and macrophage transcripts in ISRE-positive and negative infected macrophages
2015-09-07 | GSE65531 | GEO
Transcriptomics The effect of sfh deletion on Salmonella Typhimurium gene expression
2009-12-05 | GSE19230 | GEO
Genomics Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
| PRJNA184189 | ENA
Transcriptomics Transcriptome of dehydrated vs hydrated Salmonella cells
2012-12-03 | GSE38475 | GEO