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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of endrometrium biopsies in patients and control groups to investigate recurrent failure of embryo implantation

ABSTRACT: Patient-control group project investigating recurrent failure of embryo-implantation by expression analysis of endometrium biopsies

ORGANISM(S): Homo sapiens

DISEASE(S): reference

SUBMITTER: Sander van Hooff

PROVIDER: E-TABM-567 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Transcription profiling of chicken trachea on 1 and 4 week old birds infected by avian influenza virus.

Project description:Sylvia Reemers: age-related chicken in vivo infection: timecourse, 1wk ni= 1-week-old non infected, 1wk i= 1-week-old infected, 4wk ni= 4-week-old non infected, 4wk i= 4-week-old infected, Tissue type= Trachea. The aim of this study was to determine differences in host responses to avian influenza virus infection at host transcriptional level between 1- and 4-week-old birds.

2010-04-01 | E-TABM-772 | biostudies-arrayexpress

Transcription profiling of chicken lung on 1 and 4 week old birds infected by avian influenza virus.

Project description:Sylvia Reemers: age-related chicken in vivo infection: timecourse, 1wk ni= 1-week-old non infected, 1wk i= 1-week-old infected, 4wk ni= 4-week-old non infected, 4wk i= 4-week-old infected, Tissue type= Lung. The aim of this study was to determine differences in host responses to avian influenza virus infection at host transcriptional level between 1- and 4-week-old birds.

2010-04-01 | E-TABM-771 | biostudies-arrayexpress

Transcription profiling by array of yeast single and double deletion mutants of gene-specific transcription factors

Project description:Contains gene expression profiles of yeast single and double deletion mutants of gene-specific transcription factors. Genetic interactions were studied by comparing gene expression changes of double mutants with gene expression changes in the respective single mutants. Pairs of gene-specific transcription factors were chosen based on previous evidence for epistasis, including synthetic genetic interactions as well as common DNA binding. Two channel microarrays were used. RNA isolated from a large amount of wt yeast from a single culture was used as a common reference. This common reference was used in one of the channels for each hybridization and used in the statistical analysis to obtain an average expression-profile for each deletion mutant relative to the wt. Two independent cultures were hybridized on two separate microarrays. For the first hybridization the Cy5 (red) labeled cRNA from the deletion mutant is hybridized together with the Cy3 (green) labeled cRNA from the common reference. For the replicate hybridization, the labels are swapped. Each gene is represented twice on the microarray, resulting in four measurements per mutant. Using the Erlenmeyer growth protocol up to five deletion strains were grown on a single day. In the tecan platereader, up to eleven deletion strains could be grown on a single day. Wt cultures were grown parallel to the deletion mutants to assess day-to-day variance.

2015-12-24 | E-GEOD-42536 | biostudies-arrayexpress

Transcription profiling of yeast after a shift from media containing raffinose to one containg galactose

Project description:expression profile from a shift from raffinose to galatose. This serves as a control expirement.

2009-09-19 | E-TABM-693 | biostudies-arrayexpress

Transcription profiling of chicken primary bronchus and secondary bronchi on birds vaccinated under various adjuvants and challenged by avian influenza virus H9N2.

Project description:Sylvia Reemers: chicken in vivo infection: timecourse, groupI= non immunised non challenged, groupIII= non immunised challenged, groupIV= immunised challenged, groupV= immunised+w/o challenged, groupVII= immunised+Al(OH)3 challenged, groupIX= immunised+CpG challenged Tissue type= Lung1. The aim of this study was to get a better understanding of the characteristics of a protective response and provide a signature of protection after vaccination with H9N2 adjuvanted with different immunomodulators.

2010-04-11 | E-MTAB-136 | biostudies-arrayexpress

Transcription profiling of chicken paleopulmonic parabronchi on birds vaccinated under various adjuvants and challenged by avian influenza virus H9N2.

Project description:Sylvia Reemers: chicken in vivo infection: timecourse, groupI= non immunised non challenged, groupIII= non immunised challenged, groupIV= immunised challenged, groupV= immunised+w/o challenged, groupVII= immunised+Al(OH)3 challenged, groupIX= immunised+CpG challenged Tissue type= Lung4. The aim of this study was to get a better understanding of the characteristics of a protective response and provide a signature of protection after vaccination with H9N2 adjuvanted with different immunomodulators.

2010-04-01 | E-MTAB-137 | biostudies-arrayexpress

Transcription profiling of chicken trachea on birds vaccinated under various adjuvants and challenged by avian influenza virus H9N2.

Project description:Sylvia Reemers: chicken in vivo infection: timecourse, groupI= non immunised non challenged, groupIII= non immunised challenged, groupIV= immunised challenged, groupV= immunised+w/o challenged, groupVII= immunised+Al(OH)3 challenged, groupIX= immunised+CpG challenged Tissue type= Upper trachea. The aim of this study was to get a better understanding of the characteristics of a protective response and provide a signature of protection after vaccination with H9N2 adjuvanted with different immunomodulators.

2010-04-01 | E-MTAB-138 | biostudies-arrayexpress

Transcription profiling of mouse midbrain biopsies of Nurr1 knockouts (3 pools) against 1 pool of controls

Project description:mouse midbrain biopsies of Nurr1 knockouts (3 pools) against 1 pool of controls

2009-06-10 | E-TABM-711 | biostudies-arrayexpress

Transcription profiling of yeast deletion mutants of putative protein complex members

Project description:A number of putative protein complexes have been selected for experimental validation by gene expression profiling of the individual deletion mutants of the respective protein complex members.

2010-06-01 | E-TABM-654 | biostudies-arrayexpress

Transcription profiling by array of yeast wild type strains compared to a reference pool

Project description:Contains a collection of wildtype Saccharomyces cerevisiae strains for estimating the biological variation. Wildtypes are obtained from the "yeast wildtypes - platereader, wt pool bkg set" HybSet, by randomly taking 100 wt vs. refpool and 100 refpool vs. wt hybridizations.

2011-04-08 | E-TABM-984 | biostudies-arrayexpress

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