Browse
Submit Data
Databases
API
Help

Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

51 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcription profiling of yeast deletion mutants of putative protein complex members

ABSTRACT: A number of putative protein complexes have been selected for experimental validation by gene expression profiling of the individual deletion mutants of the respective protein complex members.

ORGANISM(S): Saccharomyces cerevisiae

SUBMITTER: Patrick Kemmeren

PROVIDER: E-TABM-654 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

ACCESS DATA

Json Xml

Similar Datasets

Transcription profiling of yeast after a shift from media containing raffinose to one containg galactose

Project description:expression profile from a shift from raffinose to galatose. This serves as a control expirement.

2009-09-19 | E-TABM-693 | biostudies-arrayexpress

Transcription profiling by array of yeast wild type strains compared to a reference pool

Project description:Contains a collection of wildtype Saccharomyces cerevisiae strains for estimating the biological variation. Wildtypes are obtained from the "yeast wildtypes - platereader, wt pool bkg set" HybSet, by randomly taking 100 wt vs. refpool and 100 refpool vs. wt hybridizations.

2011-04-08 | E-TABM-984 | biostudies-arrayexpress

Transcription profiling of endrometrium biopsies in patients and control groups to investigate recurrent failure of embryo implantation

Project description:Patient-control group project investigating recurrent failure of embryo-implantation by expression analysis of endometrium biopsies

2011-08-01 | E-TABM-567 | biostudies-arrayexpress

Transcription profiling of mouse midbrain biopsies of Nurr1 knockouts (3 pools) against 1 pool of controls

Project description:mouse midbrain biopsies of Nurr1 knockouts (3 pools) against 1 pool of controls

2009-06-10 | E-TABM-711 | biostudies-arrayexpress

Transcription profiling of yeast Med2, Med3, Med18, Med20 deletion mutants and with a C-terminal truncation of Med8

Project description:We made deletions of Med2, Med3, Med18, Med20 and a C-terminal truncation of Med8. We expression profiled the mutants against a common reference.

2008-03-08 | E-MEXP-1341 | biostudies-arrayexpress

Transcription profiling of chicken trachea on 1 and 4 week old birds infected by avian influenza virus.

Project description:Sylvia Reemers: age-related chicken in vivo infection: timecourse, 1wk ni= 1-week-old non infected, 1wk i= 1-week-old infected, 4wk ni= 4-week-old non infected, 4wk i= 4-week-old infected, Tissue type= Trachea. The aim of this study was to determine differences in host responses to avian influenza virus infection at host transcriptional level between 1- and 4-week-old birds.

2010-04-01 | E-TABM-772 | biostudies-arrayexpress

Transcription profiling of chicken lung on 1 and 4 week old birds infected by avian influenza virus.

Project description:Sylvia Reemers: age-related chicken in vivo infection: timecourse, 1wk ni= 1-week-old non infected, 1wk i= 1-week-old infected, 4wk ni= 4-week-old non infected, 4wk i= 4-week-old infected, Tissue type= Lung. The aim of this study was to determine differences in host responses to avian influenza virus infection at host transcriptional level between 1- and 4-week-old birds.

2010-04-01 | E-TABM-771 | biostudies-arrayexpress

RNAi profiling by array of human HEp-2 cells with siRNA-mediated depletion of RNase MRP protein components

Project description:To identify mRNA substrates for the human RNase MRP complex, we examined the effects of siRNA-mediated depletion of RNase MRP (and RNase P) on the transcriptome of HEp-2 cells. The expression of two RNase MRP protein components, hPop1 and Rpp40, was knocked-down and after 48 hours mRNA was isolated from these cells as well as from cells transfected with an siRNA targeting the GFP mRNA (siEGFP), which was used as a control. The expression levels of mRNAs were analyzed on a genome-wide scale using 21K microarrays.

2011-04-01 | E-TABM-981 | biostudies-arrayexpress

Transcriptional profiling of Caenorhabditis elegans whole-organism extract and subsequent co-immune precipitation of mRNA with the poly-A binding protein FLAG::PAB-1 specifically expressed in body wall muscle cells.

Project description:Tissue specific microarray data is obtained by generating a whole-organism extract and subsequent co-immune precipitation of mRNA with the poly-A binding protein FLAG::PAB-1 specifically expressed in body wall muscle cells (Roy et al. 2002). Different lines were compared: SV911 (control), SV912 (CYE-1/CDK-2AF), and SV985 (CYD-1/CDK-4). As reference total RNA was used.

2011-11-25 | E-TABM-886 | biostudies-arrayexpress

Transcription profiling of chicken primary bronchus and secondary bronchi on birds vaccinated under various adjuvants and challenged by avian influenza virus H9N2.

Project description:Sylvia Reemers: chicken in vivo infection: timecourse, groupI= non immunised non challenged, groupIII= non immunised challenged, groupIV= immunised challenged, groupV= immunised+w/o challenged, groupVII= immunised+Al(OH)3 challenged, groupIX= immunised+CpG challenged Tissue type= Lung1. The aim of this study was to get a better understanding of the characteristics of a protective response and provide a signature of protection after vaccination with H9N2 adjuvanted with different immunomodulators.

2010-04-11 | E-MTAB-136 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data