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Stringent and complex sequence constraints of an IGHV1-69 broadly neutralizing antibody to influenza HA stem.


ABSTRACT: IGHV1-69 is frequently utilized by broadly neutralizing influenza antibodies to the hemagglutinin (HA) stem. These IGHV1-69 HA stem antibodies have diverse complementarity-determining region (CDR) H3 sequences. Besides, their light chains have minimal to no contact with the epitope. Consequently, sequence determinants that confer IGHV1-69 antibodies with HA stem specificity remain largely elusive. Using high-throughput experiments, this study revealed the importance of light chain sequence for the IGHV1-69 HA stem antibody CR9114, which is the broadest influenza antibody known to date. Moreover, we demonstrated that the CDR H3 sequences from many other IGHV1-69 antibodies, including those to HA stem, were incompatible with CR9114. Along with mutagenesis and structural analysis, our results indicate that light chain and CDR H3 sequences coordinately determine the HA stem specificity of IGHV1-69 antibodies. Overall, this work provides molecular insights into broadly neutralizing antibody responses to influenza virus, which have important implications for universal influenza vaccine development.

SUBMITTER: Teo QW 

PROVIDER: S-EPMC10350038 | biostudies-literature | 2023 Jul

REPOSITORIES: biostudies-literature

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Stringent and complex sequence constraints of an IGHV1-69 broadly neutralizing antibody to influenza HA stem.

Teo Qi Wen QW   Wang Yiquan Y   Lv Huibin H   Tan Timothy J C TJC   Lei Ruipeng R   Mao Kevin J KJ   Wu Nicholas C NC  

bioRxiv : the preprint server for biology 20230706


IGHV1-69 is frequently utilized by broadly neutralizing influenza antibodies to the hemagglutinin (HA) stem. These IGHV1-69 HA stem antibodies have diverse complementarity-determining region (CDR) H3 sequences. Besides, their light chains have minimal to no contact with the epitope. Consequently, sequence determinants that confer IGHV1-69 antibodies with HA stem specificity remain largely elusive. Using high-throughput experiments, this study revealed the importance of light chain sequence for t  ...[more]

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