Unknown

Dataset Information

0

Testicular Germ Cell Tumor Tissue Biomarker Analysis: A Comparison of Human Protein Atlas and Individual Testicular Germ Cell Tumor Component Immunohistochemistry.


ABSTRACT: The accurate management of testicular germ cell tumors (TGCTs) depends on identifying the individual histological tumor components. Currently available data on protein expression in TGCTs are limited. The human protein atlas (HPA) is a comprehensive resource presenting the expression and localization of proteins across tissue types and diseases. In this study, we have compared the data from the HPA with our in-house immunohistochemistry on core TGCT diagnostic genes to test reliability and potential biomarker genes. We have compared the protein expression of 15 genes in TGCT patients and non-neoplastic testicles with the data from the HPA. Protein expression was converted into diagnostic positivity. Our study discovered discrepancies in three of the six core TGCT diagnostic genes, POU5F1, KIT and SOX17 in HPA. DPPA3, CALCA and TDGF1 were presented as potential novel TGCT biomarkers. MGMT was confirmed while RASSF1 and PRSS21 were identified as biomarkers of healthy testicular tissue. Finally, SALL4, SOX17, RASSF1 and PRSS21 dysregulation in the surrounding testicular tissue with complete preserved spermatogenesis of TGCT patients was detected, a potential early sign of neoplastic transformation. We highlight the importance of a multidisciplinary collaborative approach to fully understand the protein landscape of human testis and its pathologies.

SUBMITTER: Krasic J 

PROVIDER: S-EPMC10378501 | biostudies-literature | 2023 Jul

REPOSITORIES: biostudies-literature

altmetric image

Publications

Testicular Germ Cell Tumor Tissue Biomarker Analysis: A Comparison of Human Protein Atlas and Individual Testicular Germ Cell Tumor Component Immunohistochemistry.

Krasic Jure J   Skara Abramovic Lucija L   Himelreich Peric Marta M   Vanjorek Vedran V   Gangur Marko M   Zovko Dragana D   Malnar Marina M   Masic Silvija S   Demirovic Alma A   Juric Bernardica B   Ulamec Monika M   Coric Marijana M   Jezek Davor D   Kulis Tomislav T   Sincic Nino N  

Cells 20230713 14


The accurate management of testicular germ cell tumors (TGCTs) depends on identifying the individual histological tumor components. Currently available data on protein expression in TGCTs are limited. The human protein atlas (HPA) is a comprehensive resource presenting the expression and localization of proteins across tissue types and diseases. In this study, we have compared the data from the HPA with our in-house immunohistochemistry on core TGCT diagnostic genes to test reliability and poten  ...[more]

Similar Datasets

| S-EPMC6769809 | biostudies-literature
| S-EPMC10539554 | biostudies-literature
| S-EPMC10205587 | biostudies-literature
| S-EPMC3937045 | biostudies-literature
| S-EPMC2871592 | biostudies-literature
| S-EPMC5947452 | biostudies-literature
| S-EPMC5444985 | biostudies-literature
| S-EPMC8172526 | biostudies-literature
| S-EPMC9165694 | biostudies-literature
| S-EPMC7657535 | biostudies-literature