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Tuning sterol extraction kinetics yields a renal-sparing polyene antifungal.


ABSTRACT: Decades of previous efforts to develop renal-sparing polyene antifungals were misguided by the classic membrane permeabilization model1. Recently, the clinically vital but also highly renal-toxic small-molecule natural product amphotericin B was instead found to kill fungi primarily by forming extramembraneous sponge-like aggregates that extract ergosterol from lipid bilayers2-6. Here we show that rapid and selective extraction of fungal ergosterol can yield potent and renal-sparing polyene antifungals. Cholesterol extraction was found to drive the toxicity of amphotericin B to human renal cells. Our examination of high-resolution structures of amphotericin B sponges in sterol-free and sterol-bound states guided us to a promising structural derivative that does not bind cholesterol and is thus renal sparing. This derivative was also less potent because it extracts ergosterol more slowly. Selective acceleration of ergosterol extraction with a second structural modification yielded a new polyene, AM-2-19, that is renal sparing in mice and primary human renal cells, potent against hundreds of pathogenic fungal strains, resistance evasive following serial passage in vitro and highly efficacious in animal models of invasive fungal infections. Thus, rational tuning of the dynamics of interactions between small molecules may lead to better treatments for fungal infections that still kill millions of people annually7,8 and potentially other resistance-evasive antimicrobials, including those that have recently been shown to operate through supramolecular structures that target specific lipids9.

SUBMITTER: Maji A 

PROVIDER: S-EPMC10883201 | biostudies-literature | 2023 Nov

REPOSITORIES: biostudies-literature

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Tuning sterol extraction kinetics yields a renal-sparing polyene antifungal.

Maji Arun A   Soutar Corinne P CP   Zhang Jiabao J   Lewandowska Agnieszka A   Uno Brice E BE   Yan Su S   Shelke Yogesh Y   Murhade Ganesh G   Nimerovsky Evgeny E   Borcik Collin G CG   Arango Andres S AS   Lange Justin D JD   Marin-Toledo Jonnathan P JP   Lyu Yinghuan Y   Bailey Keith L KL   Roady Patrick J PJ   Holler Jordan T JT   Khandelwal Anuj A   SantaMaria Anna M AM   Sanchez Hiram H   Juvvadi Praveen R PR   Johns Gina G   Hageman Michael J MJ   Krise Joanna J   Gebremariam Teclegiorgis T   Youssef Eman G EG   Bartizal Ken K   Marr Kieren A KA   Steinbach William J WJ   Ibrahim Ashraf S AS   Patterson Thomas F TF   Wiederhold Nathan P NP   Andes David R DR   Pogorelov Taras V TV   Schwieters Charles D CD   Fan Timothy M TM   Rienstra Chad M CM   Burke Martin D MD  

Nature 20231108 7989


Decades of previous efforts to develop renal-sparing polyene antifungals were misguided by the classic membrane permeabilization model<sup>1</sup>. Recently, the clinically vital but also highly renal-toxic small-molecule natural product amphotericin B was instead found to kill fungi primarily by forming extramembraneous sponge-like aggregates that extract ergosterol from lipid bilayers<sup>2-6</sup>. Here we show that rapid and selective extraction of fungal ergosterol can yield potent and rena  ...[more]

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