LGA: A method for finding 3D similarities in protein structures.
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ABSTRACT:
SUBMITTER: Zemla A
PROVIDER: S-EPMC168977 | biostudies-literature | 2003 Jul
REPOSITORIES: biostudies-literature
Publications
LGA: A method for finding 3D similarities in protein structures.
Nucleic acids research 20030701 13
We present the LGA (Local-Global Alignment) method, designed to facilitate the comparison of protein structures or fragments of protein structures in sequence dependent and sequence independent modes. The LGA structure alignment program is available as an online service at http://PredictionCenter.llnl.gov/local/lga. Data generated by LGA can be successfully used in a scoring function to rank the level of similarity between two structures and to allow structure classification when many proteins a ...[more]
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