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Common sequence variants on 20q11.22 confer melanoma susceptibility.


ABSTRACT: We conducted a genome-wide association pooling study for cutaneous melanoma and performed validation in samples totaling 2,019 cases and 2,105 controls. Using pooling, we identified a new melanoma risk locus on chromosome 20 (rs910873 and rs1885120), with replication in two further samples (combined P < 1 x 10(-15)). The per allele odds ratio was 1.75 (1.53, 2.01), with evidence for stronger association in early-onset cases.

SUBMITTER: Brown KM 

PROVIDER: S-EPMC2755512 | biostudies-literature | 2008 Jul

REPOSITORIES: biostudies-literature

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Common sequence variants on 20q11.22 confer melanoma susceptibility.

Brown Kevin M KM   Macgregor Stuart S   Montgomery Grant W GW   Craig David W DW   Zhao Zhen Zhen ZZ   Iyadurai Kelly K   Henders Anjali K AK   Homer Nils N   Campbell Megan J MJ   Stark Mitchell M   Thomas Shane S   Schmid Helen H   Holland Elizabeth A EA   Gillanders Elizabeth M EM   Duffy David L DL   Maskiell Judith A JA   Jetann Jodie J   Ferguson Megan M   Stephan Dietrich A DA   Cust Anne E AE   Whiteman David D   Green Adele A   Olsson Håkan H   Puig Susana S   Ghiorzo Paola P   Hansson Johan J   Demenais Florence F   Goldstein Alisa M AM   Gruis Nelleke A NA   Elder David E DE   Bishop Julia Newton JN   Kefford Richard F RF   Giles Graham G GG   Armstrong Bruce K BK   Aitken Joanne F JF   Hopper John L JL   Martin Nicholas G NG   Trent Jeffrey M JM   Mann Graham J GJ   Hayward Nicholas K NK  

Nature genetics 20080518 7


We conducted a genome-wide association pooling study for cutaneous melanoma and performed validation in samples totaling 2,019 cases and 2,105 controls. Using pooling, we identified a new melanoma risk locus on chromosome 20 (rs910873 and rs1885120), with replication in two further samples (combined P < 1 x 10(-15)). The per allele odds ratio was 1.75 (1.53, 2.01), with evidence for stronger association in early-onset cases. ...[more]

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