Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Aqua-bis(2-iodo-acetato-?O)(1,10-phenanthroline-?N,N')copper(II).

ABSTRACT: In the title compound, [Cu(C(2)H(2)IO(2))(2)(C(12)H(8)N(2))(H(2)O)], the Cu(II) ion is coordinated by two N atoms [Cu-N = 2.013?(4) and 2.024?(4)?Å] from a 1,10-phenanthroline ligand and three O atoms [Cu-O = 1.940?(4)-2.261?(4)?Å] from two carboxyl ligands and a water mol-ecule in a distorted square-pyramidal geometry. One iodo-acetate O atom [Cu-O = 2.775?(4)?Å] completes the coordination to form a distorted octa-hedron. Inter-molecular O-H?O hydrogen bonds link the mol-ecules into centrosymmetric dimers, which are further packed by ?-? inter-actions between the 1,10-phenanthroline ligands into layers parallel to the ab plane. The crystal packing also exhibits short inter-molecular I?I contacts of 3.6772?(9)?Å and weak C-H?O hydrogen bonds.

SUBMITTER: Zhao R

PROVIDER: S-EPMC2968381 | biostudies-literature | 2009 Jan

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

Aqua-bis(2-iodo-acetato-κO)(1,10-phenanthroline-κN,N')copper(II).

Zhao Rengao R Sun Junshan J Lu Jie J Li Jikun J

Acta crystallographica. Section E, Structure reports online 20090131 Pt 2

In the title compound, [Cu(C(2)H(2)IO(2))(2)(C(12)H(8)N(2))(H(2)O)], the Cu(II) ion is coordinated by two N atoms [Cu-N = 2.013 (4) and 2.024 (4) Å] from a 1,10-phenanthroline ligand and three O atoms [Cu-O = 1.940 (4)-2.261 (4) Å] from two carboxyl ligands and a water mol-ecule in a distorted square-pyramidal geometry. One iodo-acetate O atom [Cu-O = 2.775 (4) Å] completes the coordination to form a distorted octa-hedron. Inter-molecular O-H⋯O hydrogen bonds link the mol-ecules into centrosymme ...[more]

PMID: 21581830

Similar Datasets

Aqua-bis(dichloro-acetato-κO)(1,10-phenanthroline-κN,N')copper(II).

Project description:In the title complex, [Cu(C(2)HCl(2)O(2))(2)(C(12)H(8)N(2))(H(2)O)], the Cu(II) ion has a distorted square-pyramidal coordination geometry. The equatorial positions are occupied by two N atoms from a 1,10-phenanthroline ligand [Cu-N = 1.994 (3) and 2.027 (3) Å] and two O atoms from dichloro-acetate ligands and a water mol-ecule [Cu-O = 1.971 (2) and 1.939 (2) Å]. One O atom from another dichloro-acetate ligand occupies the apical positon [Cu-O = 2.152 (3) Å]. Inter-molecular O-H⋯O hydrogen bonds link the mol-ecules into centrosymmetric dimers. The crystal packing also exhibits weak inter-molecular C-H⋯O hydrogen bonds, π-π inter-actions [centroid-centroid distance = 3.734 (2) Å] and short inter-molecular Cl⋯Cl contacts [3.306 (2) and 3.278 (2) Å].

| S-EPMC2968015 | biostudies-literature

Aqua-bis(2-chloro-acetato-κO)(1,10-phenanthroline-κN,N')copper(II).

Project description:In the title complex, [Cu(C(2)H(2)ClO(2))(2)(C(12)H(8)N(2))(H(2)O)], the Cu(II) ion is five-coordinated by two N atoms [Cu-N = 2.005 (2) and 2.029 (2) Å] from the 1,10-phenanthroline ligand, two O atoms [Cu-O = 1.943 (2)-1.966 (2) Å] from two 2-chloro-acetate ligands and one water mol-ecule [Cu-O = 2.253 (2) Å] in a distorted square-pyramidal geometry. The crystal structure exhibits inter-molecular O-H⋯O hydrogen bonds, short Cl⋯Cl contacts [3.334 (1) Å] and π-π inter-actions [centroid-centroid distance 3.621 (11) Å].

| S-EPMC2960263 | biostudies-literature

Aqua-(1,10-phenanthroline-?N,N')bis-(trimethyl-acetato)-?O,O';?O-cobalt(II).

Project description:In the title compound, [Co(C(5)H(9)O(2))(2)(C(12)H(8)N(2))(H(2)O)], the Co(II) atom is coordinated in a distorted octahedral environment by three carboxyl O atoms of two trimethyl-acetate ligands, one aqua O atom and two N atoms from 1,10-phen-anthroline. The crystal structure is stabilized by O-H?O hydrogen bonds and ?-? stacking inter-actions [inter-planar distance between inter-digitating 1,10-phenanthroline ligands = 3.378?(2)?Å].

| S-EPMC2977194 | biostudies-literature

Di-?-chlorido-bis-[(1,10-phenanthroline-?N,N')(trichloro-acetato-?O)copper(II)].

Project description:The title compound, [Cu(2)(C(2)Cl(3)O(2))(2)Cl(2)(C(12)H(8)N(2))(2)], features a centrosymmetric binuclear complex. The coordination geometry around the Cu(II) atom is square-pyramidal, comprising two N atoms from a symmetrically chelating 1,10-phenanthroline ligand, one O atom from a trichloro-acetate ligand and two Cl(-) anions. In addition, there is a weak intra-molecular Cu?O inter-action of 2.9403?(14)?Å involving the carbonyl O atom of the trichloro-acetate ligand. The central Cu(2)Cl(2) core takes the form of a rhombus, owing to the disparate Cu-Cl bond lengths. Mol-ecules are connected in the crystal structure by C-H?Cl and C-H?O inter-actions.

| S-EPMC3297214 | biostudies-literature

Bis(2-bromo-acetato-κO,O')(1,10-phenanthroline-κN,N')copper(II).

Project description:The two halves of the title compound, [Cu(C(2)H(2)BrO(2))(2)(C(12)H(8)N(2))], are related by twofold symmetry along the b axis through the central Cu(II) ion. The Cu(II) ion is coordinated by two symmetry-related N atoms from the 1,10-phenanthroline ligand and four O atoms from two 2-bromo-acetate ligands, showing a distorted octahedral geometry. Weak inter-molecular C-H⋯O inter-actions link neighbouring mol-ecules.

| S-EPMC2968837 | biostudies-literature

Aqua-bis-(3-fluoro-benzoato-?O)(1,10-phenanthroline-?N,N')copper(II).

Project description:In the title compound, [Cu(C(7)H(4)FO(2))(2)(C(12)H(8)N(2))(H(2)O)], the coordination around the Cu(II) atom is square-pyramidal. The equatorial positions are occupied by two N atoms from a 1,10-phenanthroline ligand [Cu-N = 2.008?(3) and 2.019?(3)?Å] and two O atoms from 3-fluoro-benzoate ligands and a water mol-ecule [Cu-O = 1.950?(2) and 1.978?(2)?Å]. One O atom from another 3-fluoro-benzoate ligand occupies the apical positon [Cu-O = 2.210?(2)?Å]. Hydrogen bonds occur between coordinated water mol-ecules and benzoate ligands, while O-H?O, C-H?O, C-H?F and ?-? stacking [centroid-centroid distance = 3.731?(2)?Å] inter-actions consolidate the crystal packing.

| S-EPMC3089262 | biostudies-literature

Di-μ-glutarato-κO:O-bis-[aqua-(1,10-phenanthroline-κN,N')copper(II)].

Project description:In the centrosymmetric dinuclear title complex, [Cu(2)(C(5)H(6)O(4))(2)(C(12)H(18)N(2))(2)(H(2)O)(2)], the Cu(II) atom displays a dis-torted square-pyramidal coordination environment with the basal plane occupied by two phenanthroline N atoms and two O atoms from different glutarate dianions while a water mol-ecule is located at the apical position. Of the two water H atoms, one is engaged in an intra-molecular hydrogen bond with a free oxygen of the dianion whereas the second is engaged in an inter-molecular hydrogen bond, building a corrugated layer parallel to (100). These layers are further connected through π-π stacking inter-actions involving symmetry-related phenanthroline rings [centroid-centroid distance = 3.5599 (17) and 3.5617 (18) Å], building a three dimensionnal network. C-H⋯π inter-actions involving the phenanthroline ring system are also observed.

| S-EPMC3099891 | biostudies-literature

Bis(1,10-phenanthroline-?N,N')(phenyl-acetato-?O)copper(II) phenyl-acetate hexa-hydrate.

Project description:In the title compound, [Cu(C(8)H(7)O(2))(C(12)H(8)N(2))(2)](C(8)H(7)O(2))·6H(2)O, the Cu atom is in a distorted square-pyramidal coordination environment. The six crystallographically independent uncoordinated water mol-ecules are inter-connected by hydrogen bonds, completing dodeca-water (H(2)O)(12) clusters which are hydrogen bonded to the carboxyl-ate groups of phenyl-acetate anions, building up one-dimensional anionic chains propagating along [100]. Between the cationic and anionic chains are hydrogen bonds from water mol-ecules to the carboxyl-ate O atoms belonging to the phenyl-acetato ligands.

| S-EPMC2959544 | biostudies-literature

(Acetato-κO,O')bis-(1,10-phenanthroline-κN,N')copper(II) trifluoro-acetate tetra-hydrate.

Project description:In the title compound, [Cu(CH(3)CO(2))(C(12)H(8)N(2))(2)](CF(3)CO(2))·4H(2)O, the Cu(II) atom shows a distorted octa-hedral coordination with four N atoms [Cu-N = 2.015 (3)-2.244 (3) Å] from the two phenanthroline ligands and two O atoms from the acetate [Cu-O = 1.953 (3) and 2.764 (3) Å]. Strong inter-molecular O-H⋯O hydrogen-bonding inter-actions consolidate the crystal packing. The F atoms of the anion are disordered over two positions in a 0.5233 (3):0.4767 (3) ratio.

| S-EPMC3007037 | biostudies-literature

Di-?-methacrylato-?O:O'-bis-[aqua-bis(1,10-phenanthroline-?N,N')copper(II)] dinitrate dihydrate.

Project description:The title complex, [Cu(2)(C(4)H(5)O(2))(2)(C(12)H(8)N(2))(2)(H(2)O)(2)](NO(3))(2)·2H(2)O, contains a dimeric [Cu(2)(C(4)H(5)O(2))(2)(C(12)H(8)N(2))(2)(H(2)O)(2)](2+) dication with two five-coordinated Cu(II) ions linked by two methacrylate ions in a syn-syn bridging arrangement. The dication possesses pseudo-twofold rotational symmetry. The penta-coordination of each Cu(II) ion has a distorted square-pyramidal geometry, with two N donors from a phenanthroline ligand and two carboxyl-ate O atoms occupying basal sites and the apical position being occupied by a water mol-ecule. In the crystal packing, mol-ecules are linked to form a three-dimensional framework by O-H?O and C-H?O hydrogen bonds and ?-? inter-actions [centroid-centroid distances of 3.6039?(15), 3.5301?(15), 3.6015?(15), 3.6496?(15) and 3.6858?(15)?Å].

| S-EPMC2961707 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data