Browse
Submit Data
Databases
API
Help

Dataset Information

23 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

2-Amino-4,6-dimethyl-pyrimidine-anthranilic acid (1/1).

ABSTRACT: In the title 1:1 adduct, C(6)H(9)N(3)·C(7)H(7)NO(2), the crystal structure is stabilized by hydrogen bonds involving two different R(2) (2)(8) motifs. One of them is formed by the inter-action of 2-amino-4,6-dimethyl-pyrimidine (AMPY) with the carboxyl group of anthranilic acid (AA) through N-H?O and O-H?N hydrogen bonds, whereas the other is formed through the inter-action of two centrosymmetrically related pyrimidines involving N-H?N hydrogen bonds. These two combined motifs form a heterotetra-mer. The heterotetra-mer sheets are stacked into three-dimensional network.

SUBMITTER: Ebenezer S

PROVIDER: S-EPMC2983637 | biostudies-literature | 2010 Feb

REPOSITORIES: biostudies-literature

ACCESS DATA

Json Xml

Publications

2-Amino-4,6-dimethyl-pyrimidine-anthranilic acid (1/1).

Ebenezer Samuel S Muthiah Packianathan Thomas PT

Acta crystallographica. Section E, Structure reports online 20100203 Pt 3

In the title 1:1 adduct, C(6)H(9)N(3)·C(7)H(7)NO(2), the crystal structure is stabilized by hydrogen bonds involving two different R(2) (2)(8) motifs. One of them is formed by the inter-action of 2-amino-4,6-dimethyl-pyrimidine (AMPY) with the carboxyl group of anthranilic acid (AA) through N-H⋯O and O-H⋯N hydrogen bonds, whereas the other is formed through the inter-action of two centrosymmetrically related pyrimidines involving N-H⋯N hydrogen bonds. These two combined motifs form a heterotetra ...[more]

PMID: 21580290

Similar Datasets

Hydrogen-bonding patterns in the cocrystal 2-amino-4,6-dimethoxy-pyrimidine-anthranilic acid (1/1).

Project description:In the title cocrystal, C(6)H(9)N(3)O(2)·C(7)H(7)NO(2), the asymmetric unit contains two crystallographically independent 2-amino-4,6-dimeth-oxy pyrimidine-anthranilic acid adducts. The 2-amino-4,6-dimeth-oxy pyrimidine mol-ecules inter-act with the carboxylic group of the respective anthranilic acid mol-ecules through N-H?O and O-H?N hydrogen bonds, forming a cyclic hydrogen-bonded motif R(2) (2)(8). The pyrimidine mol-ecules also form base pairs via a pair of N-H?N hydrogen bonds, forming another R(2) (2)(8) motif. The typical intra-molecular N-H?O hydrogen bond is observed in the anthranilic acid mol-ecules. Furthermore, the crystal structure is stabilized by C-H?O hydrogen bonds.

| S-EPMC2915181 | biostudies-literature

2-Amino-4,6-dimethyl-pyrimidine-benzoic acid (1/1).

Project description:The crystal of the title compound, C(6)H(9)N(3)·C(7)H(6)O(2), contains tetra-meric hydrogen-bonded units comprising a central pair of 2-amino-pyrimidine mol-ecules linked across a centre of inversion by N-H?N hydrogen bonds and two pendant benzoic acid mol-ecules attached through N-H?O and O-H?N hydrogen bonds. These hydrogen-bonded units are arranged into layers in (002).

| S-EPMC2969298 | biostudies-other

(2-Amino-4,6-dimethyl-pyrimidine-?N)(2-amino-4-methyl-pyrimidine-?N)silver(I) nitrate.

Project description:Colourless crystals of the title compound, [Ag(C(5)H(7)N(3))(C(6)H(9)N(3))]NO(3), separated out of a solution of 2-amino-4-methyl-pyrimidine, 2-amino-4,6-dimethyl-pyrimidine and silver nitrate in water and methanol. The central Ag(I) ion is coordinated by two different N atoms in the aromatic rings of the ligands, with an N-Ag-N angle of 173.9?(2)°. The crystal structure is composed of two complexed cations and stabilized by an inter-molecular N-H?O and N-H?N hydrogen-bond network and there is ?-? stacking of the aromatic rings [inter-planar distance 3.651?(10)?Å].

| S-EPMC2970381 | biostudies-literature

(2-Amino-4,6-dimethyl-pyrimidine-?N)(2-amino-4-methyl-pyrimidine-?N)silver(I) perchlorate.

Project description:Colourless crystals of the title mixed ligand complex, [Ag(C(5)H(7)N(3))(C(6)H(9)N(3))]ClO(4), were obtained from a solution of 2-amino-4-methyl-pyrimidine, 2-amino-4,6-dimethyl-pyrim-idine and silver perchlorate in water and methanol. The crystal structure is stabilized by inter-molecular N-H?O and N-H?N hydrogen bonds and ?-? stacking inter-actions of the aromatic rings of the two ligands [inter-planar distance = 3.652?(10)?Å]. The Ag(I) atom shows a linear coordination [N-Ag-N = 174.6?(1)°].

| S-EPMC2970461 | biostudies-literature

2-Iodo-4,6-dimethyl-pyrimidine.

Project description:In the title compound, C(6)H(7)IN(2), the non-H atoms of the mol-ecule are located on a crystallographic mirror plane; the H atoms of the methyl groups are therefore disordered over two positions of equal occupancy. In the crystal structure, short inter-molecular I?N contacts [3.390?(3)?Å] are found, linking the mol-ecules into zigzag chains. In addition, there are inter-molecular ?-? stacking inter-actions between the pyrimidine rings of adjacent mol-ecules [centroid-centroid distance = 3.5168?(10)?Å], resulting in a two-dimensional supra-molecular architecture.

| S-EPMC2983557 | biostudies-literature

4,6-Dimethyl-2-p-tolyl-pyrimidine.

Project description:The mol-ecule of the title compound, C(13)H(14)N(2), is located on a crystallographic mirror plane. The aromatic rings make a dihedral angle of 3.4?(2)°. The H atoms of the methyl groups on the benzene ring are disordered over two positions; their site-occupation factors were fixed at 0.5. In the crystal, inter-molecular C-H?? contacts form infinite chains perpendicular to the b axis.

| S-EPMC2971259 | biostudies-literature

2-Amino-4,6-di-methyl-pyrimidine-sorbic acid (1/1).

Project description:In the crystal of the title compound, C6H9N3·C6H8O2, the 2-amino-4,6-di-methyl-pyrimidine and sorbic acid mol-ecules are linked through N-H?O and O-H?N hydrogen bonds, which generate a cyclic bimolecular heterosynthon with an R 2 (2)(8) graph-set motif. Further, two inversion-related pyrimidine mol-ecules are base-paired via a pair of N-H?N hydrogen bonds, forming a cyclic bimolecular homosynthon with a graph-set of R 2 (2)(8). A discrete hetero tetra-meric supra-molecular unit along the b axis is formed by the fusion of two heterosynthons and one homosynthon. An aromatic ?-? inter-action [centroid-centroid distance = 3.7945?(16)?Å] is observed between these tetra-meric units.

| S-EPMC3793739 | biostudies-literature

2-(1H-Imidazol-1-yl)-4,6-dimethyl-pyrimidine.

Project description:The asymmetric unit of the title compound, C(9)H(10)N(4), consists of two mol-ecules in which the dihedral angles between the planes of the imidazole and pyrimidine rings are 4.8?(1) and 2.1?(1)°.

| S-EPMC3247496 | biostudies-literature

2-Amino-4,6-dimethyl-pyrimidinium dihydrogenphosphate.

Project description:In the crystal structure of the title compound, C(6)H(10)N(3) (+)·H(2)PO(4) (-), the cations and anions are linked by inter-molecular O-H?O and N-H?O hydrogen bonds, forming a two-dimensional network. Additional stabilization is provided by weak inter-molecular C-H?O inter-actions. N-H?N inter-actions are also present.

| S-EPMC2971252 | biostudies-literature

2-Amino-4,6-dimethyl-pyridinium benzoate.

Project description:In the title compound, C(7)H(11)N(2) (+)·C(7)H(5)O(2) (-), the 2-amino-4,6-dimethyl-pyridinium cation and the benzoate anion are linked by two N-H?O hydrogen bonds, forming an R(2) (2)(8) ring motif. The H atoms in both the methyl groups are rotationally disordered, with fixed site occupancies of 0.50. In the crystal structure, the mol-ecules are stabilized by inter-molecular N-H?O hydrogen bonds. A ?-? inter-action, with a centroid-centroid distance of 3.661?(2)?Å, is also observed.

| S-EPMC2983164 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data