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Solution NMR structure of the ribosomal protein RP-L35Ae from Pyrococcus furiosus.

ABSTRACT: The ribosome consists of small and large subunits each composed of dozens of proteins and RNA molecules. However, the functions of many of the individual protomers within the ribosome are still unknown. In this article, we describe the solution NMR structure of the ribosomal protein RP-L35Ae from the archaeon Pyrococcus furiosus. RP-L35Ae is buried within the large subunit of the ribosome and belongs to Pfam protein domain family PF01247, which is highly conserved in eukaryotes, present in a few archaeal genomes, but absent in bacteria. The protein adopts a six-stranded anti-parallel ?-barrel analogous to the "tRNA binding motif" fold. The structure of the P. furiosus RP-L35Ae presented in this article constitutes the first structural representative from this protein domain family.

SUBMITTER: Snyder DA

PROVIDER: S-EPMC3639469 | biostudies-literature | 2012 Jul

REPOSITORIES: biostudies-literature

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Solution NMR structure of the ribosomal protein RP-L35Ae from Pyrococcus furiosus.

Snyder David A DA Aramini James M JM Yu Bomina B Huang Yuanpeng J YJ Xiao Rong R Cort John R JR Shastry Ritu R Ma Li-Chung LC Liu Jinfeng J Rost Burkhard B Acton Thomas B TB Kennedy Michael A MA Montelione Gaetano T GT

Proteins 20120416 7

The ribosome consists of small and large subunits each composed of dozens of proteins and RNA molecules. However, the functions of many of the individual protomers within the ribosome are still unknown. In this article, we describe the solution NMR structure of the ribosomal protein RP-L35Ae from the archaeon Pyrococcus furiosus. RP-L35Ae is buried within the large subunit of the ribosome and belongs to Pfam protein domain family PF01247, which is highly conserved in eukaryotes, present in a few ...[more]

PMID: 22422653

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