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Oligodeoxynucleotides containing multiple thiophene-modified isomorphic fluorescent nucleosides.

ABSTRACT: 5-(Thien-2-yl)-2'-deoxyuridine, an isomorphic fluorescent nucleoside analogue, was incorporated into multiple positions within single stranded oligodeoxynucleotides. With minimal impact on duplex stability and overall structure, oligonucleotides containing three identical isomorphic fluorescent nucleosides in alternating or neighboring positions display enhanced, sequence-dependent on-signals for either duplex formation or dissociation.

SUBMITTER: Noe MS

PROVIDER: S-EPMC3799853 | biostudies-literature | 2013 Aug

REPOSITORIES: biostudies-literature

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Oligodeoxynucleotides containing multiple thiophene-modified isomorphic fluorescent nucleosides.

Noé Mary S MS Sinkeldam Renatus W RW Tor Yitzhak Y

The Journal of organic chemistry 20130805 16

5-(Thien-2-yl)-2'-deoxyuridine, an isomorphic fluorescent nucleoside analogue, was incorporated into multiple positions within single stranded oligodeoxynucleotides. With minimal impact on duplex stability and overall structure, oligonucleotides containing three identical isomorphic fluorescent nucleosides in alternating or neighboring positions display enhanced, sequence-dependent on-signals for either duplex formation or dissociation. ...[more]

PMID: 23859712

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