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Genetic variants influencing circulating lipid levels and risk of coronary artery disease.


ABSTRACT: Genetic studies might provide new insights into the biological mechanisms underlying lipid metabolism and risk of CAD. We therefore conducted a genome-wide association study to identify novel genetic determinants of low-density lipoprotein cholesterol (LDL-C), high-density lipoprotein cholesterol (HDL-C), and triglycerides.We combined genome-wide association data from 8 studies, comprising up to 17 723 participants with information on circulating lipid concentrations. We did independent replication studies in up to 37 774 participants from 8 populations and also in a population of Indian Asian descent. We also assessed the association between single-nucleotide polymorphisms (SNPs) at lipid loci and risk of CAD in up to 9 633 cases and 38 684 controls. We identified 4 novel genetic loci that showed reproducible associations with lipids (probability values, 1.6×10(-8) to 3.1×10(-10)). These include a potentially functional SNP in the SLC39A8 gene for HDL-C, an SNP near the MYLIP/GMPR and PPP1R3B genes for LDL-C, and at the AFF1 gene for triglycerides. SNPs showing strong statistical association with 1 or more lipid traits at the CELSR2, APOB, APOE-C1-C4-C2 cluster, LPL, ZNF259-APOA5-A4-C3-A1 cluster and TRIB1 loci were also associated with CAD risk (probability values, 1.1×10(-3) to 1.2×10(-9)).We have identified 4 novel loci associated with circulating lipids. We also show that in addition to those that are largely associated with LDL-C, genetic loci mainly associated with circulating triglycerides and HDL-C are also associated with risk of CAD. These findings potentially provide new insights into the biological mechanisms underlying lipid metabolism and CAD risk.

SUBMITTER: Waterworth DM 

PROVIDER: S-EPMC3891568 | biostudies-literature | 2010 Nov

REPOSITORIES: biostudies-literature

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Genetic variants influencing circulating lipid levels and risk of coronary artery disease.

Waterworth Dawn M DM   Ricketts Sally L SL   Song Kijoung K   Chen Li L   Zhao Jing Hua JH   Ripatti Samuli S   Aulchenko Yurii S YS   Zhang Weihua W   Yuan Xin X   Lim Noha N   Luan Jian'an J   Ashford Sofie S   Wheeler Eleanor E   Young Elizabeth H EH   Hadley David D   Thompson John R JR   Braund Peter S PS   Johnson Toby T   Struchalin Maksim M   Surakka Ida I   Luben Robert R   Khaw Kay-Tee KT   Rodwell Sheila A SA   Loos Ruth J F RJ   Boekholdt S Matthijs SM   Inouye Michael M   Deloukas Panagiotis P   Elliott Paul P   Schlessinger David D   Sanna Serena S   Scuteri Angelo A   Jackson Anne A   Mohlke Karen L KL   Tuomilehto Jaako J   Roberts Robert R   Stewart Alexandre A   Kesäniemi Y Antero YA   Mahley Robert W RW   Grundy Scott M SM   McArdle Wendy W   Cardon Lon L   Waeber Gérard G   Vollenweider Peter P   Chambers John C JC   Boehnke Michael M   Abecasis Gonçalo R GR   Salomaa Veikko V   Järvelin Marjo-Riitta MR   Ruokonen Aimo A   Barroso Inês I   Epstein Stephen E SE   Hakonarson Hakon H HH   Rader Daniel J DJ   Reilly Muredach P MP   Witteman Jacqueline C M JC   Hall Alistair S AS   Samani Nilesh J NJ   Strachan David P DP   Barter Philip P   van Duijn Cornelia M CM   Kooner Jaspal S JS   Peltonen Leena L   Wareham Nicholas J NJ   McPherson Ruth R   Mooser Vincent V   Sandhu Manjinder S MS  

Arteriosclerosis, thrombosis, and vascular biology 20100923 11


<h4>Objective</h4>Genetic studies might provide new insights into the biological mechanisms underlying lipid metabolism and risk of CAD. We therefore conducted a genome-wide association study to identify novel genetic determinants of low-density lipoprotein cholesterol (LDL-C), high-density lipoprotein cholesterol (HDL-C), and triglycerides.<h4>Methods and results</h4>We combined genome-wide association data from 8 studies, comprising up to 17 723 participants with information on circulating lip  ...[more]

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