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PPI layouts: BioJS components for the display of Protein-Protein Interactions.

ABSTRACT: SUMMARY:We present two web-based components for the display of Protein-Protein Interaction networks using different self-organizing layout methods: force-directed and circular. These components conform to the BioJS standard and can be rendered in an HTML5-compliant browser without the need for third-party plugins. We provide examples of interaction networks and how the components can be used to visualize them, and refer to a more complex tool that uses these components. AVAILABILITY:http://github.com/biojs/biojs; http://dx.doi.org/10.5281/zenodo.7753.

SUBMITTER: Salazar GA

PROVIDER: S-EPMC4103490 | biostudies-literature | 2014

REPOSITORIES: biostudies-literature

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PPI layouts: BioJS components for the display of Protein-Protein Interactions.

Salazar Gustavo A GA Meintjes Ayton A Mulder Nicola N

F1000Research 20140213

<h4>Summary</h4>We present two web-based components for the display of Protein-Protein Interaction networks using different self-organizing layout methods: force-directed and circular. These components conform to the BioJS standard and can be rendered in an HTML5-compliant browser without the need for third-party plugins. We provide examples of interaction networks and how the components can be used to visualize them, and refer to a more complex tool that uses these components.<h4>Availability</ ...[more]

PMID: 25075288

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