Unknown

Dataset Information

0

How much information can be obtained from tracking the position of the leading edge in a scratch assay?


ABSTRACT: Moving cell fronts are an essential feature of wound healing, development and disease. The rate at which a cell front moves is driven, in part, by the cell motility, quantified in terms of the cell diffusivity D, and the cell proliferation rate ?. Scratch assays are a commonly reported procedure used to investigate the motion of cell fronts where an initial cell monolayer is scratched, and the motion of the front is monitored over a short period of time, often less than 24 h. The simplest way of quantifying a scratch assay is to monitor the progression of the leading edge. Use of leading edge data is very convenient because, unlike other methods, it is non-destructive and does not require labelling, tracking or counting individual cells among the population. In this work, we study short-time leading edge data in a scratch assay using a discrete mathematical model and automated image analysis with the aim of investigating whether such data allow us to reliably identify D and ?. Using a naive calibration approach where we simply scan the relevant region of the (D, ?) parameter space, we show that there are many choices of D and ? for which our model produces indistinguishable short-time leading edge data. Therefore, without due care, it is impossible to estimate D and ? from this kind of data. To address this, we present a modified approach accounting for the fact that cell motility occurs over a much shorter time scale than proliferation. Using this information, we divide the duration of the experiment into two periods, and we estimate D using data from the first period, whereas we estimate ? using data from the second period. We confirm the accuracy of our approach using in silico data and a new set of in vitro data, which shows that our method recovers estimates of D and ? that are consistent with previously reported values except that that our approach is fast, inexpensive, non-destructive and avoids the need for cell labelling and cell counting.

SUBMITTER: Johnston ST 

PROVIDER: S-EPMC4208362 | biostudies-literature | 2014 Aug

REPOSITORIES: biostudies-literature

altmetric image

Publications

How much information can be obtained from tracking the position of the leading edge in a scratch assay?

Johnston Stuart T ST   Simpson Matthew J MJ   McElwain D L Sean DL  

Journal of the Royal Society, Interface 20140801 97


Moving cell fronts are an essential feature of wound healing, development and disease. The rate at which a cell front moves is driven, in part, by the cell motility, quantified in terms of the cell diffusivity D, and the cell proliferation rate λ. Scratch assays are a commonly reported procedure used to investigate the motion of cell fronts where an initial cell monolayer is scratched, and the motion of the front is monitored over a short period of time, often less than 24 h. The simplest way of  ...[more]

Similar Datasets

| S-EPMC4848397 | biostudies-literature
| S-EPMC3529002 | biostudies-literature
| S-EPMC3056603 | biostudies-literature
| EMPIAR-11002 | biostudies-other
| EMPIAR-11003 | biostudies-other
| S-EPMC5851530 | biostudies-literature
2020-03-25 | GSE117489 | GEO
| S-EPMC3863902 | biostudies-other
| S-EPMC4774958 | biostudies-literature
| S-EPMC5391181 | biostudies-literature