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Complete genome sequence of an emerging genotype of tobacco streak virus in the United States.

ABSTRACT: We report here the complete genome sequence of an emerging genotype of tobacco streak virus (TSV) infecting zucchini squash in Florida (TSV_FL13-07), obtained using deep sequencing of short RNAs (sRNAs) and validation by Sanger sequencing. TSV_FL13-07 shares only <90% sequence identity in all three genomic RNAs to several known U.S. isolates.

SUBMITTER: Padmanabhan C

PROVIDER: S-EPMC4223465 | biostudies-literature | 2014 Nov

REPOSITORIES: biostudies-literature

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Complete genome sequence of an emerging genotype of tobacco streak virus in the United States.

Padmanabhan Chellappan C Gao Shan S Li Rugang R Zhang Shouan S Fei Zhangjun Z Ling Kai-Shu KS

Genome announcements 20141106 6

We report here the complete genome sequence of an emerging genotype of tobacco streak virus (TSV) infecting zucchini squash in Florida (TSV_FL13-07), obtained using deep sequencing of short RNAs (sRNAs) and validation by Sanger sequencing. TSV_FL13-07 shares only <90% sequence identity in all three genomic RNAs to several known U.S. isolates. ...[more]

PMID: 25377714

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