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Dynamic GATA4 enhancers shape the chromatin landscape central to heart development and disease.


ABSTRACT: How stage-specific enhancer dynamics modulate gene expression patterns essential for organ development, homeostasis and disease is not well understood. Here, we addressed this question by mapping chromatin occupancy of GATA4--a master cardiac transcription factor--in heart development and disease. We find that GATA4 binds and participates in establishing active chromatin regions by stimulating H3K27ac deposition, which facilitates GATA4-driven gene expression. GATA4 chromatin occupancy changes markedly between fetal and adult heart, with a limited binding sites overlap. Cardiac stress restored GATA4 occupancy to a subset of fetal sites, but many stress-associated GATA4 binding sites localized to loci not occupied by GATA4 during normal heart development. Collectively, our data show that dynamic, context-specific transcription factors occupancy underlies stage-specific events in development, homeostasis and disease.

SUBMITTER: He A 

PROVIDER: S-EPMC4236193 | biostudies-literature | 2014 Sep

REPOSITORIES: biostudies-literature

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Dynamic GATA4 enhancers shape the chromatin landscape central to heart development and disease.

He Aibin A   Gu Fei F   Hu Yong Y   Ma Qing Q   Ye Lillian Yi LY   Akiyama Jennifer A JA   Visel Axel A   Pennacchio Len A LA   Pu William T WT  

Nature communications 20140924


How stage-specific enhancer dynamics modulate gene expression patterns essential for organ development, homeostasis and disease is not well understood. Here, we addressed this question by mapping chromatin occupancy of GATA4--a master cardiac transcription factor--in heart development and disease. We find that GATA4 binds and participates in establishing active chromatin regions by stimulating H3K27ac deposition, which facilitates GATA4-driven gene expression. GATA4 chromatin occupancy changes m  ...[more]

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