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A proteome-scale map of the human interactome network.


ABSTRACT: Just as reference genome sequences revolutionized human genetics, reference maps of interactome networks will be critical to fully understand genotype-phenotype relationships. Here, we describe a systematic map of ?14,000 high-quality human binary protein-protein interactions. At equal quality, this map is ?30% larger than what is available from small-scale studies published in the literature in the last few decades. While currently available information is highly biased and only covers a relatively small portion of the proteome, our systematic map appears strikingly more homogeneous, revealing a "broader" human interactome network than currently appreciated. The map also uncovers significant interconnectivity between known and candidate cancer gene products, providing unbiased evidence for an expanded functional cancer landscape, while demonstrating how high-quality interactome models will help "connect the dots" of the genomic revolution.

SUBMITTER: Rolland T 

PROVIDER: S-EPMC4266588 | biostudies-literature | 2014 Nov

REPOSITORIES: biostudies-literature

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A proteome-scale map of the human interactome network.

Rolland Thomas T   Taşan Murat M   Charloteaux Benoit B   Pevzner Samuel J SJ   Zhong Quan Q   Sahni Nidhi N   Yi Song S   Lemmens Irma I   Fontanillo Celia C   Mosca Roberto R   Kamburov Atanas A   Ghiassian Susan D SD   Yang Xinping X   Ghamsari Lila L   Balcha Dawit D   Begg Bridget E BE   Braun Pascal P   Brehme Marc M   Broly Martin P MP   Carvunis Anne-Ruxandra AR   Convery-Zupan Dan D   Corominas Roser R   Coulombe-Huntington Jasmin J   Dann Elizabeth E   Dreze Matija M   Dricot Amélie A   Fan Changyu C   Franzosa Eric E   Gebreab Fana F   Gutierrez Bryan J BJ   Hardy Madeleine F MF   Jin Mike M   Kang Shuli S   Kiros Ruth R   Lin Guan Ning GN   Luck Katja K   MacWilliams Andrew A   Menche Jörg J   Murray Ryan R RR   Palagi Alexandre A   Poulin Matthew M MM   Rambout Xavier X   Rasla John J   Reichert Patrick P   Romero Viviana V   Ruyssinck Elien E   Sahalie Julie M JM   Scholz Annemarie A   Shah Akash A AA   Sharma Amitabh A   Shen Yun Y   Spirohn Kerstin K   Tam Stanley S   Tejeda Alexander O AO   Wanamaker Shelly A SA   Twizere Jean-Claude JC   Vega Kerwin K   Walsh Jennifer J   Cusick Michael E ME   Xia Yu Y   Barabási Albert-László AL   Iakoucheva Lilia M LM   Aloy Patrick P   De Las Rivas Javier J   Tavernier Jan J   Calderwood Michael A MA   Hill David E DE   Hao Tong T   Roth Frederick P FP   Vidal Marc M  

Cell 20141101 5


Just as reference genome sequences revolutionized human genetics, reference maps of interactome networks will be critical to fully understand genotype-phenotype relationships. Here, we describe a systematic map of ?14,000 high-quality human binary protein-protein interactions. At equal quality, this map is ?30% larger than what is available from small-scale studies published in the literature in the last few decades. While currently available information is highly biased and only covers a relati  ...[more]

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