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IsoMIF Finder: online detection of binding site molecular interaction field similarities.


ABSTRACT: UNLABELLED:IsoMIF Finder is an online server for the identification of molecular interaction field (MIF) similarities. User defined binding site MIFs can be compared to datasets of pre-calculated MIFs or against a user-defined list of PDB entries. The interface can be used for the prediction of function, identification of potential cross-reactivity or polypharmacological targets and drug repurposing. Detected similarities can be viewed in a browser or within a PyMOL session. AVAILABILITY AND IMPLEMENTATION:IsoMIF Finder uses JSMOL (no java plugin required), is cross-browser and freely available at bcb.med.usherbrooke.ca/imfi.

SUBMITTER: Chartier M 

PROVIDER: S-EPMC4743630 | biostudies-literature | 2016 Feb

REPOSITORIES: biostudies-literature

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IsoMIF Finder: online detection of binding site molecular interaction field similarities.

Chartier Matthieu M   Adriansen Etienne E   Najmanovich Rafael R  

Bioinformatics (Oxford, England) 20151025 4


<h4>Unlabelled</h4>IsoMIF Finder is an online server for the identification of molecular interaction field (MIF) similarities. User defined binding site MIFs can be compared to datasets of pre-calculated MIFs or against a user-defined list of PDB entries. The interface can be used for the prediction of function, identification of potential cross-reactivity or polypharmacological targets and drug repurposing. Detected similarities can be viewed in a browser or within a PyMOL session.<h4>Availabil  ...[more]

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