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Discovery of new mutually orthogonal bioorthogonal cycloaddition pairs through computational screening.

ABSTRACT: Density functional theory (DFT) calculations and experiments in tandem led to discoveries of new reactivities and selectivities involving bioorthogonal sydnone cycloadditions. Dibenzocyclooctyne derivatives (DIBAC and BARAC) were identified to be especially reactive dipolarophiles, which undergo the (3 + 2) cycloadditions with N-phenyl sydnone with the rate constant of up to 1.46 M-1 s-1. Most significantly, the sydnone-dibenzocyclooctyne and norbornene-tetrazine cycloadditions were predicted to be mutually orthogonal. This was validated experimentally and used for highly selective fluorescence labeling of two proteins simultaneously.

SUBMITTER: Narayanam MK

PROVIDER: S-EPMC4763938 | biostudies-literature | 2016 Feb

REPOSITORIES: biostudies-literature

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Discovery of new mutually orthogonal bioorthogonal cycloaddition pairs through computational screening.

Narayanam Maruthi Kumar MK Liang Yong Y Houk K N KN Murphy Jennifer M JM

Chemical science 20151111 2

Density functional theory (DFT) calculations and experiments in tandem led to discoveries of new reactivities and selectivities involving bioorthogonal sydnone cycloadditions. Dibenzocyclooctyne derivatives (DIBAC and BARAC) were identified to be especially reactive dipolarophiles, which undergo the (3 + 2) cycloadditions with N-phenyl sydnone with the rate constant of up to 1.46 M-1 s-1. Most significantly, the sydnone-dibenzocyclooctyne and norbornene-tetrazine cyc ...[more]

PMID: 29910881

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