BioNetGen 2.2: advances in rule-based modeling.
Ontology highlight
ABSTRACT: Availability and implementation
Stable BioNetGen releases (Linux, Mac OS/X and Windows), with documentation, are available at http://bionetgen.org Source code is available at http://github.com/RuleWorld/bionetgen CONTACT: bionetgen.help@gmail.comSupplementary information: Supplementary data are available at Bioinformatics online.
SUBMITTER: Harris LA
PROVIDER: S-EPMC5079481 | biostudies-literature | 2016 Nov
REPOSITORIES: biostudies-literature
Publications
BioNetGen 2.2: advances in rule-based modeling.
Harris Leonard A LA Hogg Justin S JS Tapia José-Juan JJ Sekar John A P JA Gupta Sanjana S Korsunsky Ilya I Arora Arshi A Barua Dipak D Sheehan Robert P RP Faeder James R JR
Bioinformatics (Oxford, England) 20160708 21
: BioNetGen is an open-source software package for rule-based modeling of complex biochemical systems. Version 2.2 of the software introduces numerous new features for both model specification and simulation. Here, we report on these additions, discussing how they facilitate the construction, simulation and analysis of larger and more complex models than previously possible.<h4>Availability and implementation</h4>Stable BioNetGen releases (Linux, Mac OS/X and Windows), with documentation, are av ...[more]
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