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Structure of photosystem II and substrate binding at room temperature.


ABSTRACT: Light-induced oxidation of water by photosystem II (PS II) in plants, algae and cyanobacteria has generated most of the dioxygen in the atmosphere. PS II, a membrane-bound multi-subunit pigment protein complex, couples the one-electron photochemistry at the reaction centre with the four-electron redox chemistry of water oxidation at the Mn4CaO5 cluster in the oxygen-evolving complex (OEC). Under illumination, the OEC cycles through five intermediate S-states (S0 to S4), in which S1 is the dark-stable state and S3 is the last semi-stable state before O-O bond formation and O2 evolution. A detailed understanding of the O-O bond formation mechanism remains a challenge, and will require elucidation of both the structures of the OEC in the different S-states and the binding of the two substrate waters to the catalytic site. Here we report the use of femtosecond pulses from an X-ray free electron laser (XFEL) to obtain damage-free, room temperature structures of dark-adapted (S1), two-flash illuminated (2F; S3-enriched), and ammonia-bound two-flash illuminated (2F-NH3; S3-enriched) PS II. Although the recent 1.95?Å resolution structure of PS II at cryogenic temperature using an XFEL provided a damage-free view of the S1 state, measurements at room temperature are required to study the structural landscape of proteins under functional conditions, and also for in situ advancement of the S-states. To investigate the water-binding site(s), ammonia, a water analogue, has been used as a marker, as it binds to the Mn4CaO5 cluster in the S2 and S3 states. Since the ammonia-bound OEC is active, the ammonia-binding Mn site is not a substrate water site. This approach, together with a comparison of the native dark and 2F states, is used to discriminate between proposed O-O bond formation mechanisms.

SUBMITTER: Young ID 

PROVIDER: S-EPMC5201176 | biostudies-literature | 2016 Dec

REPOSITORIES: biostudies-literature

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Structure of photosystem II and substrate binding at room temperature.

Young Iris D ID   Ibrahim Mohamed M   Chatterjee Ruchira R   Gul Sheraz S   Fuller Franklin F   Koroidov Sergey S   Brewster Aaron S AS   Tran Rosalie R   Alonso-Mori Roberto R   Kroll Thomas T   Michels-Clark Tara T   Laksmono Hartawan H   Sierra Raymond G RG   Stan Claudiu A CA   Hussein Rana R   Zhang Miao M   Douthit Lacey L   Kubin Markus M   de Lichtenberg Casper C   Long Vo Pham P   Nilsson Håkan H   Cheah Mun Hon MH   Shevela Dmitriy D   Saracini Claudio C   Bean Mackenzie A MA   Seuffert Ina I   Sokaras Dimosthenis D   Weng Tsu-Chien TC   Pastor Ernest E   Weninger Clemens C   Fransson Thomas T   Lassalle Louise L   Bräuer Philipp P   Aller Pierre P   Docker Peter T PT   Andi Babak B   Orville Allen M AM   Glownia James M JM   Nelson Silke S   Sikorski Marcin M   Zhu Diling D   Hunter Mark S MS   Lane Thomas J TJ   Aquila Andy A   Koglin Jason E JE   Robinson Joseph J   Liang Mengning M   Boutet Sébastien S   Lyubimov Artem Y AY   Uervirojnangkoorn Monarin M   Moriarty Nigel W NW   Liebschner Dorothee D   Afonine Pavel V PV   Waterman David G DG   Evans Gwyndaf G   Wernet Philippe P   Dobbek Holger H   Weis William I WI   Brunger Axel T AT   Zwart Petrus H PH   Adams Paul D PD   Zouni Athina A   Messinger Johannes J   Bergmann Uwe U   Sauter Nicholas K NK   Kern Jan J   Yachandra Vittal K VK   Yano Junko J  

Nature 20161121 7633


Light-induced oxidation of water by photosystem II (PS II) in plants, algae and cyanobacteria has generated most of the dioxygen in the atmosphere. PS II, a membrane-bound multi-subunit pigment protein complex, couples the one-electron photochemistry at the reaction centre with the four-electron redox chemistry of water oxidation at the Mn<sub>4</sub>CaO<sub>5</sub> cluster in the oxygen-evolving complex (OEC). Under illumination, the OEC cycles through five intermediate S-states (S<sub>0</sub>  ...[more]

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