Dataset Information

Messenger RNA and MicroRNA transcriptomic signatures of cardiometabolic risk factors.

ABSTRACT:

Background

Cardiometabolic (CM) risk factors are heritable and cluster in individuals. We hypothesized that CM risk factors are associated with multiple shared and unique mRNA and microRNA (miRNA) signatures. We examined associations of mRNA and miRNA levels with 6 CM traits: body mass index, HDL-cholesterol and triglycerides, fasting glucose, and systolic and diastolic blood pressures through cross-sectional analysis of 2812 Framingham Heart Study who had whole blood collection for RNA isolation for mRNA and miRNA expression studies and who consented to genetic research. We excluded participants taking medication for hypertension, dyslipidemia, or diabetes. We measured mRNA (n?=?17,318; using the Affymetrix GeneChip Human Exon 1.0 ST Array) and miRNA (n?=?315; using qRT-PCR) expression in whole blood. We used linear regression for mRNA analyses and a combination of linear and logistic regression for miRNA analyses. We conducted miRNA-mRNA coexpression and gene ontology enrichment analyses to explore relations between pleiotropic miRNAs, mRNA expression, and CM trait clustering.

Results

We identified hundreds of significant associations between mRNAs, miRNAs, and individual CM traits. Four mRNAs (FAM13A, CSF2RB, HIST1H2AC, WNK1) were associated with all 6 CM traits (FDR?ConclusionsWe identified mRNA and miRNA signatures of individual CM traits and their clustering. Implicated transcripts may play causal roles in CM risk or be downstream consequences of CM risk factors on the transcriptome. Studies are needed to establish whether or not pleiotropic circulating transcripts illuminate causal pathways for CM risk.

SUBMITTER: McManus DD

PROVIDER: S-EPMC5299677 | biostudies-literature | 2017 Feb

REPOSITORIES: biostudies-literature

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Publications

Messenger RNA and MicroRNA transcriptomic signatures of cardiometabolic risk factors.

McManus David D DD Rong Jian J Huan Tianxiao T Lacey Sean S Tanriverdi Kahraman K Munson Peter J PJ Larson Martin G MG Joehanes Roby R Murthy Venkatesh V Shah Ravi R Freedman Jane E JE Levy Daniel D

BMC genomics 20170208 1

<h4>Background</h4>Cardiometabolic (CM) risk factors are heritable and cluster in individuals. We hypothesized that CM risk factors are associated with multiple shared and unique mRNA and microRNA (miRNA) signatures. We examined associations of mRNA and miRNA levels with 6 CM traits: body mass index, HDL-cholesterol and triglycerides, fasting glucose, and systolic and diastolic blood pressures through cross-sectional analysis of 2812 Framingham Heart Study who had whole blood collection for RNA ...[more]

PMID: 28178938

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Dataset Information

Messenger RNA and MicroRNA transcriptomic signatures of cardiometabolic risk factors.

Background

Results

Publications

Messenger RNA and MicroRNA transcriptomic signatures of cardiometabolic risk factors.

Similar Datasets

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