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Draft genome sequence of Xylaria sp., the causal agent of taproot decline of soybean in the southern United States.

ABSTRACT: The draft genome of Xylaria sp. isolate MSU_SB201401, causal agent of taproot decline of soybean in the southern U.S., is presented here. The genome assembly was 56.7 Mb in size with an L50 of 246. A total of 10,880 putative protein-encoding genes were predicted, including 647 genes encoding carbohydrate-active enzymes and 1053 genes encoding secreted proteins. This is the first draft genome of a plant-pathogenic Xylaria sp. associated with soybean. The draft genome of Xylaria sp. isolate MSU_SB201401 will provide an important resource for future experiments to determine the molecular basis of pathogenesis.

SUBMITTER: Sharma S

PROVIDER: S-EPMC5767910 | biostudies-literature | 2018 Apr

REPOSITORIES: biostudies-literature

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Draft genome sequence of Xylaria sp., the causal agent of taproot decline of soybean in the southern United States.

Sharma Sandeep S Zaccaron Alex Z AZ Ridenour John B JB Allen Tom W TW Conner Kassie K Doyle Vinson P VP Price Trey T Sikora Edward E Singh Raghuwinder R Spurlock Terry T Tomaso-Peterson Maria M Wilkerson Tessie T Bluhm Burton H BH

Data in brief 20180103

The draft genome of Xylaria sp. isolate MSU_SB201401, causal agent of taproot decline of soybean in the southern U.S., is presented here. The genome assembly was 56.7 Mb in size with an L50 of 246. A total of 10,880 putative protein-encoding genes were predicted, including 647 genes encoding carbohydrate-active enzymes and 1053 genes encoding secreted proteins. This is the first draft genome of a plant-pathogenic Xylaria sp. associated with soybean. The draft genome of Xylaria</ ...[more]

PMID: 29349107

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