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Fodis: Software for Protein Unfolding Analysis.


ABSTRACT: The folding dynamics of proteins at the single-molecule level has been studied with single-molecule force spectroscopy experiments for 20 years, but a common standardized method for the analysis of the collected data and for sharing among the scientific community members is still not available. We have developed a new open-source tool-Fodis-for the analysis of the force-distance curves obtained in single-molecule force spectroscopy experiments, providing almost automatic processing, analysis, and classification of the obtained data. Our method provides also a classification of the possible unfolding pathways and the structural heterogeneity present during the unfolding of proteins.

SUBMITTER: Galvanetto N 

PROVIDER: S-EPMC5883950 | biostudies-literature | 2018 Mar

REPOSITORIES: biostudies-literature

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Fodis: Software for Protein Unfolding Analysis.

Galvanetto Nicola N   Perissinotto Andrea A   Pedroni Andrea A   Torre Vincent V  

Biophysical journal 20180301 6


The folding dynamics of proteins at the single-molecule level has been studied with single-molecule force spectroscopy experiments for 20 years, but a common standardized method for the analysis of the collected data and for sharing among the scientific community members is still not available. We have developed a new open-source tool-Fodis-for the analysis of the force-distance curves obtained in single-molecule force spectroscopy experiments, providing almost automatic processing, analysis, an  ...[more]

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