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Dlk1-Dio3 locus-derived lncRNAs perpetuate postmitotic motor neuron cell fate and subtype identity.


ABSTRACT: The mammalian imprinted Dlk1-Dio3 locus produces multiple long non-coding RNAs (lncRNAs) from the maternally inherited allele, including Meg3 (i.e., Gtl2) in the mammalian genome. Although this locus has well-characterized functions in stem cell and tumor contexts, its role during neural development is unknown. By profiling cell types at each stage of embryonic stem cell-derived motor neurons (ESC~MNs) that recapitulate spinal cord development, we uncovered that lncRNAs expressed from the Dlk1-Dio3 locus are predominantly and gradually enriched in rostral motor neurons (MNs). Mechanistically, Meg3 and other Dlk1-Dio3 locus-derived lncRNAs facilitate Ezh2/Jarid2 interactions. Loss of these lncRNAs compromises the H3K27me3 landscape, leading to aberrant expression of progenitor and caudal Hox genes in postmitotic MNs. Our data thus illustrate that these lncRNAs in the Dlk1-Dio3 locus, particularly Meg3, play a critical role in maintaining postmitotic MN cell fate by repressing progenitor genes and they shape MN subtype identity by regulating Hox genes.

SUBMITTER: Yen YP 

PROVIDER: S-EPMC6221546 | biostudies-literature | 2018 Oct

REPOSITORIES: biostudies-literature

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<i>Dlk1-Dio3</i> locus-derived lncRNAs perpetuate postmitotic motor neuron cell fate and subtype identity.

Yen Ya-Ping YP   Hsieh Wen-Fu WF   Tsai Ya-Yin YY   Lu Ya-Lin YL   Liau Ee Shan ES   Hsu Ho-Chiang HC   Chen Yen-Chung YC   Liu Ting-Chun TC   Chang Mien M   Li Joye J   Lin Shau-Ping SP   Hung Jui-Hung JH   Chen Jun-An JA  

eLife 20181012


The mammalian imprinted <i>Dlk1-Dio3</i> locus produces multiple long non-coding RNAs (lncRNAs) from the maternally inherited allele, including <i>Meg3</i> (i.e., <i>Gtl2</i>) in the mammalian genome. Although this locus has well-characterized functions in stem cell and tumor contexts, its role during neural development is unknown. By profiling cell types at each stage of embryonic stem cell-derived motor neurons (ESC~MNs) that recapitulate spinal cord development, we uncovered that lncRNAs expr  ...[more]

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