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Minimum Information about an Uncultivated Virus Genome (MIUViG).

ABSTRACT: We present an extension of the Minimum Information about any (x) Sequence (MIxS) standard for reporting sequences of uncultivated virus genomes. Minimum Information about an Uncultivated Virus Genome (MIUViG) standards were developed within the Genomic Standards Consortium framework and include virus origin, genome quality, genome annotation, taxonomic classification, biogeographic distribution and in silico host prediction. Community-wide adoption of MIUViG standards, which complement the Minimum Information about a Single Amplified Genome (MISAG) and Metagenome-Assembled Genome (MIMAG) standards for uncultivated bacteria and archaea, will improve the reporting of uncultivated virus genomes in public databases. In turn, this should enable more robust comparative studies and a systematic exploration of the global virosphere.

SUBMITTER: Roux S 

PROVIDER: S-EPMC6871006 | biostudies-literature | 2019 Jan

REPOSITORIES: biostudies-literature

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Minimum Information about an Uncultivated Virus Genome (MIUViG).

Roux Simon S   Adriaenssens Evelien M EM   Dutilh Bas E BE   Koonin Eugene V EV   Kropinski Andrew M AM   Krupovic Mart M   Kuhn Jens H JH   Lavigne Rob R   Brister J Rodney JR   Varsani Arvind A   Amid Clara C   Aziz Ramy K RK   Bordenstein Seth R SR   Bork Peer P   Breitbart Mya M   Cochrane Guy R GR   Daly Rebecca A RA   Desnues Christelle C   Duhaime Melissa B MB   Emerson Joanne B JB   Enault François F   Fuhrman Jed A JA   Hingamp Pascal P   Hugenholtz Philip P   Hurwitz Bonnie L BL   Ivanova Natalia N NN   Labonté Jessica M JM   Lee Kyung-Bum KB   Malmstrom Rex R RR   Martinez-Garcia Manuel M   Mizrachi Ilene Karsch IK   Ogata Hiroyuki H   Páez-Espino David D   Petit Marie-Agnès MA   Putonti Catherine C   Rattei Thomas T   Reyes Alejandro A   Rodriguez-Valera Francisco F   Rosario Karyna K   Schriml Lynn L   Schulz Frederik F   Steward Grieg F GF   Sullivan Matthew B MB   Sunagawa Shinichi S   Suttle Curtis A CA   Temperton Ben B   Tringe Susannah G SG   Thurber Rebecca Vega RV   Webster Nicole S NS   Whiteson Katrine L KL   Wilhelm Steven W SW   Wommack K Eric KE   Woyke Tanja T   Wrighton Kelly C KC   Yilmaz Pelin P   Yoshida Takashi T   Young Mark J MJ   Yutin Natalya N   Allen Lisa Zeigler LZ   Kyrpides Nikos C NC   Eloe-Fadrosh Emiley A EA  

Nature biotechnology 20181217 1

We present an extension of the Minimum Information about any (x) Sequence (MIxS) standard for reporting sequences of uncultivated virus genomes. Minimum Information about an Uncultivated Virus Genome (MIUViG) standards were developed within the Genomic Standards Consortium framework and include virus origin, genome quality, genome annotation, taxonomic classification, biogeographic distribution and in silico host prediction. Community-wide adoption of MIUViG standards, which complement the Minim  ...[more]

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